| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3960677 = | 43 (0.990) | 3 (0.070) | 3/244 | NT | 6.6% | intergenic (‑249/‑80) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein |
| ? | NC_002947 | 3960711 = | 43 (1.030) | intergenic (‑283/‑46) | mnxG/PP_3491 | manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein | |||||
AATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCG > NC_002947/3960564‑3960850 | catgctggttgcggacttcggccagtacatggtctgttgctgccggggtatgagcgtgtgcagtcattgcgttctccctgctttgttattgattttccaagtgaagtctggagTTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTc > 1:715999‑M1/114‑150 (MQ=255) gggggACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGa < 1:656237/150‑1 (MQ=255) aaTCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGGACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATGCTGCGATCCTCCAGCGAACTCCAGACTTCACTTg > 1:591629/1‑150 (MQ=255) aaTCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTg > 1:1110623/1‑150 (MQ=255) ctcggccagtacatggtctgttgctgccggggtatgagcgtgtgcagtcattgcgttctccctgctttgttattgattttccaagtgaagtctggagTTCGCATGCCAGGATCCTGCGATCCTCCAGCGAAc > 1:843639‑M1/98‑132 (MQ=255) ctcggccagtacatggtctgttgctgccggggtatgagcgtgtgcagtcattgcgttctccctgctttgttattgattttccaagtgaagtctggagTTCGCATGCCAGGATCCTGCGATCCTCCAGCGAAc < 2:843639‑M1/35‑1 (MQ=255) gCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATaa > 1:732722/1‑150 (MQ=255) gCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATaa > 2:802921/1‑150 (MQ=255) cAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAAc > 2:882337/1‑150 (MQ=255) gctgctCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCCGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGc > 1:247334/1‑150 (MQ=255) acaAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGaa < 1:882337/150‑1 (MQ=255) caAGCGCGCGCTGGCCTCACACAAGGTAACAACGCATGTTTCTCTTTCACAATTTTCGATTGTGCAAGGCAATTTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAAc < 1:247461/150‑1 (MQ=255) cgcgcgcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCaa < 1:391979/150‑1 (MQ=255) cgcgcgcAAGCCGCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGAAGGGCAAGTTCGCATGACTCCAGCCTGCGATACTCCTGCGAACTCCAGAATTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCaa < 1:922051/150‑1 (MQ=255) gcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 1:664726/150‑1 (MQ=255) gcTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 1:210223/150‑1 (MQ=255) gCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATc > 1:512775/1‑117 (MQ=255) gCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATc < 2:512775/117‑1 (MQ=255) acacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCt > 2:208742/1‑150 (MQ=255) cacaAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTc > 1:1113937/1‑150 (MQ=255) caAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCAt > 2:1017129/1‑150 (MQ=255) tAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACGGCACACGCTCATAcccc > 1:334773/1‑150 (MQ=255) aaaaaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCg < 1:894776/150‑1 (MQ=255) aaaaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATc > 2:960322/1‑102 (MQ=255) aaaaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATc < 1:960322/102‑1 (MQ=255) aaaCGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGgc > 2:1013356/1‑150 (MQ=255) cACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCaa < 1:613119/150‑1 (MQ=255) ttGCACAATTGTCGATTGTGCATGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGGGAGCTCCAGACTTCACTTGAAAAAACAATAACAAAGCAGGGAGAACTCAATGGCTGCACACGCTCATACCCCGGCGGCAACAGACCATGt > 2:336916/1‑150 (MQ=255) ttGCACAATCGACAATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGt > 1:979526/1‑150 (MQ=255) caATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTgg < 1:969470/150‑1 (MQ=255) ttGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt > 1:124022/1‑107 (MQ=255) ttGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACt < 2:124022/107‑1 (MQ=255) acaaTTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAgg < 2:979526/147‑1 (MQ=255) gATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAAAAACAAAGCAGGGAGAACGCAATGACTGCACACGCCCATACCCCGGCAGCAACAGACCATGTACTGGCAGAGGTc > 1:254684/1‑150 (MQ=255) aTTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTcc < 1:208742/150‑1 (MQ=255) gCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGAt > 2:954680/1‑150 (MQ=255) gagttcgctggaggatcgcaggatcctggcatgcgaaCTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAAGTCCGCAaccagcatg > 1:715999‑M2/38‑146 (MQ=255) gttcgctggaggatcgcaggatcctggcatgcgaaCTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAg < 2:843639‑M2/97‑1 (MQ=255) gttcgctggaggatcgcaggatcctggcatgcgaaCTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAg > 1:843639‑M2/36‑132 (MQ=255) tGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGa > 2:224161/1‑150 (MQ=255) tGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAAGCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGa > 1:256656/1‑150 (MQ=255) cAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGAccc > 2:342866/1‑150 (MQ=255) aGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCt > 2:840622/1‑150 (MQ=255) gacccTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGa < 1:952447/147‑1 (MQ=255) gCGATCCTCCAGCGAACTCCAGACTTCACTTAGAAGATCCATAACAAAGCGGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGcc < 2:910935/150‑1 (MQ=255) cGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGaa > 1:936825/1‑144 (MQ=255) cGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGaa < 2:936825/144‑1 (MQ=255) cGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGccc > 1:938758/1‑150 (MQ=255) gATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCa < 2:749754/150‑1 (MQ=255) ctccAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCg < 2:247334/150‑1 (MQ=255) | AATCGGGGGACGGAATCCCGTGGGGGCAAAGGCTGCTCCACAAGCGCGCGCTGGCCTCACACAAGGTAAAAACGCACGGTACCCTTGCACAATTGTCGATTGTGCAAGGCAAATTCGCATGCCAGGATCCTGCGATCCTCCAGCGAACTCCAGACTTCACTTGGAAAATCAATAACAAAGCAGGGAGAACGCAATGACTGCACACGCTCATACCCCGGCAGCAACAGACCATGTACTGGCCGAGGTCCGCAACCAGATCGGCCACCTGACCCTGAACCGCCCAGCCG > NC_002947/3960564‑3960850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |