New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5385527 =	43 (0.990)	5 (0.130)	4/234	NT	11.7%	coding (210/1146 nt)	lldD	L‑lactate dehydrogenase
	?	NC_002947	5385567 =	36 (0.900)					coding (250/1146 nt)	lldD	L‑lactate dehydrogenase

CCTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCTGTATGTACTCAAGGA  >  NC_002947/5385419‑5385715                                                                                                                                                     |                                                                                                                                                     ccTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTTGCCCCGGTCGGCCTCACCGGCATGTa                                                                                                                                                     >  1:282132/1‑150 (MQ=255)  gcgggtgccacttcttcgatcgggcacaccgacacagtcgacatggtgaacgggatgccatgggccgccgctgcgcgtgcggcctgcacttcgccacggcgggcgtaCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTAc                                                                                                                                                    >  1:640072‑M1/108‑150 (MQ=255)   tGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTAcg                                                                                                                                                   >  1:546065/1‑150 (MQ=255)                 tcGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGaa                                                                                                                                     >  1:28810/1‑150 (MQ=255)                 tcGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGaa                                                                                                                                     >  2:299209/1‑150 (MQ=255)                      ccTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCa                                                                                                                                <  2:147804/150‑1 (MQ=255)                       cTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCCGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAg                                                                                                                               >  2:179677/1‑150 (MQ=255)                        tGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAgg                                                                                                                              <  2:48776/150‑1 (MQ=255)                                   gCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACTGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCa                                                                                                                   <  2:258892/150‑1 (MQ=255)                                     ccTGCGCCAGCGCGTGCTGAAAAACATGTCCCAGCTCATGCTGGACAGCAGGGGGTTCGACGCAACGCTGAGCATGCCGGTGGCCTTGGTCCCGCTCGGCCTCGCCGGCCTGTAAGCCCGCCGGGGCGAAGGGCAGGCCGCCCGCGCAgc                                                                                                                 >  2:349672/1‑150 (MQ=255)                                            cAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGATGATACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGcc                                                                                                          >  2:1122063/1‑150 (MQ=255)                                            cAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGcc                                                                                                          >  1:877796/1‑150 (MQ=255)                                                      tGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATcc                                                                                                >  1:958370/1‑150 (MQ=255)                                                          caacaTGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGtt                                                                                            >  2:112903/1‑150 (MQ=255)                                                           aacaTGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCGCGTTc                                                                                           >  1:471563/1‑150 (MQ=255)                                                             caTGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCAACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCAc                                                                                         >  1:261814/1‑150 (MQ=255)                                                              aTGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTgg                                                                                                                                         >  1:1129325/1‑101 (MQ=255)                                                              aTGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTgg                                                                                                                                         <  2:1129325/101‑1 (MQ=255)                                                                  ccGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGt                                                                                    >  2:452055/1‑150 (MQ=255)                                                                   cGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGt                                                                                    <  1:65039/149‑1 (MQ=255)                                                                   cGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGt                                                                                    >  2:65039/1‑149 (MQ=255)                                                                       cTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACt                                                                               <  1:119441/150‑1 (MQ=255)                                                                           gCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTgtgt                                                                           <  2:28810/150‑1 (MQ=255)                                                                                gAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGgtg                                                                      >  2:461512/1‑150 (MQ=255)                                                                                     cAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGccc                                                                 >  2:100478/1‑150 (MQ=255)                                                                                       aGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGa                                                               >  1:104468/1‑150 (MQ=255)                                                                                            ttCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGGTCgtg                                                          <  1:869512/150‑3 (MQ=255)                                                                                               gacgaAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTgtgt                                                                           >  1:29103/1‑130 (MQ=255)                                                                                               gacgaAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTgtgt                                                                           <  2:29103/130‑1 (MQ=255)                                                                                                acgaAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGaagaag                                                      >  2:594798/1‑150 (MQ=255)                                                                                                      cccTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAgc                                                                                                                 <  1:757700/85‑1 (MQ=255)                                                                                                      cccTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAgc                                                                                                                 >  2:757700/1‑85 (MQ=255)                                                                                                       ccTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCa                                                                                                        <  1:151654/93‑1 (MQ=255)                                                                                                       ccTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCa                                                                                                        >  2:151654/1‑93 (MQ=255)                                                                                                          gtacatgccggtgaggccgaccggggccaaggccaccggcatgTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGc                                            >  1:640072‑M2/44‑150 (MQ=255)                                                                                                                gccggtgaggccgaccggggccaaggccaccggcatgTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCCCCATGt                                                                                    >  2:229307‑M2/38‑104 (MQ=255)                                                                                                                gccggtgaggccgaccggggccaaggccaccggcatgTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGt                                                                                    <  1:229307‑M2/67‑1 (MQ=255)                                                                                                                gccggtgaggccgaccggggccaaggccaccggcatgCACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATg                                                                                                      <  2:888078‑M2/49‑1 (MQ=255)                                                                                                                gccggtgaggccgaccggggccaaggccaccggcatgCACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATg                                                                                                      >  1:888078‑M2/38‑86 (MQ=255)                                                                                                                 CCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAAc                                     >  2:1119763‑M1/1‑150 (MQ=255)                                                                                                                      GGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGcc                                >  2:150490‑M1/1‑150 (MQ=255)                                                                                                                        ccTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGa                              >  2:814321/1‑150 (MQ=255)                                                                                                                               cccGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGtt                       >  1:474135/1‑150 (MQ=255)                                                                                                                                ccGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTc                      <  1:461512/150‑1 (MQ=255)                                                                                                                                   ggcGGCCTCACCGGCATGTAAGCCGGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGGTCATGGTGTCGCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAg                   <  1:299209/148‑1 (MQ=255)                                                                                                                                     cGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCt                 <  2:154230/150‑1 (MQ=255)                                                                                                                                       gCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCtgt               <  2:104468/150‑1 (MQ=255)                                                                                                                                        ccTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCTCCCTGTGGTGGGTGTCCAGAACTGACAGCGGAGAAGGGGCACCCGCCATCAACCGGCCGATGTGGTGCCAGCtgta              >  1:976495/1‑150 (MQ=255)                                                                                                                                        ccTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCtgta              >  1:1105660/1‑150 (MQ=255)                                                                                                                                         cTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCtgtat             <  2:261814/150‑1 (MQ=255)                                                                                                                                          tCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGCAGTGAAAGAGGCCAGCAACCGGCCGATGTGGTTCCAGCtgtatg            >  2:932643/1‑150 (MQ=255)                                                                                                                                          tCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCtgtatg            >  2:497279/1‑150 (MQ=255)                                                                                                                                                 catgTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCTGTATGTACTCaa     <  2:958370‑M2/146‑1 (MQ=255)                                                                                                                                                  atgTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCTGTATGTACTCAAg    <  1:497279‑M2/147‑1 (MQ=255)                                                                                                                                                    gTACGCCCCCCGTGGCGCGGGGCGTGCGGTACGCCTAGTCTCGGCTCTTGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCTGTATGTACTCATggt  <  1:879550/150‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCTGCGCCACAACGTCTCGGACCTGGCCGGCATCGCCCTGCGCCAGCGCGTGCTGAACAACATGTCCGAGCTCAGCCTGGAAACCAAGCTGTTCGACGAAACCCTGAGCATGCCGGTGGCCTTGGCCCCGGTCGGCCTCACCGGCATGTACGCCCGCCGTGGCGAAGTGCAGGCCGCACGCGCAGCGGCGGCCCATGGCATCCCGTTCACCATGTCGACTGTGTCGGTGTGCCCGATCGAAGAAGTGGCACCCGCCATCAACCGGCCGATGTGGTTCCAGCTGTATGTACTCAAGGA  >  NC_002947/5385419‑5385715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.