New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6136887 | 37 (0.850) | 4 (0.100) | 4/234 | NT | 10.2% | coding (1172/1410 nt) | copS | copper sensor protein |
? | NC_002947 | = 6136925 | 36 (0.900) | coding (1210/1410 nt) | copS | copper sensor protein |
GCTGTATCCAATATTCTCTCGAATGCCGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAGGGGTTACAGCAT > NC_002947/6136781‑6137069 | gCTGTATCCAATATTCTCTCGAATGCCGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAttttt > 1:415059‑M2/1‑145 (MQ=255) tGTATACAATATTCTCTCGAATGCCGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttga < 1:668921‑M2/150‑8 (MQ=255) atTCTCTCGCCTGCCGCTCGATACCCGCCGGGCTAAAGCGCGATCCCGGAAGAAATTCATCAAGCCGCAAACAAAGCACCCCTCACTCCCACAAACAGCGGGCCAACCATTGACCCACAACACAACAACAAGATTTTTGATCGCTCCTAc > 1:259616/1‑150 (MQ=255) atTCTCTCGAATGCCGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTAc > 1:259615/1‑150 (MQ=255) cGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAATCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGc > 2:433111/1‑150 (MQ=255) cGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGACGCAGACAAGGTGACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCAGGCCGACCCGGc > 2:616658/1‑150 (MQ=255) gTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCa > 2:78853/1‑150 (MQ=255) cacGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCgaga > 1:337550/1‑150 (MQ=255) ggacggaAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAgggggg > 2:925091/1‑150 (MQ=255) gacggaACCCAGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGCTTTTTGATCGCTGCTGCCGGGCCGACCCGGCAAGGCGAGAGGGGGGa < 1:1017641/150‑1 (MQ=255) gggATCTCGGTAGAACCTCAGCAATCCGCAGACAAGGCAACCCCCACGATCAAAACAAATGCGGCAACCATTGCCACGAAAAGCAGCTGCAACTTGTTGGAATGGCTGTTCGTGGCCTTCCCTGCAAGGCGAGAGGGGGGACCTAGCAAt < 2:971486/150‑1 (MQ=255) aTCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCt > 1:456515/1‑150 (MQ=255) tctcTGTAGACTGTCAGCAAGCCCCACACTAGGTAACCCTCACTATAAAAGACGGCGGGGCAACCATTGACCCACCACACTTCAACGAGATGTTCGCTCGCTTCTACCGGGCCGTCCCGGCAAGGTGAGAGGGGGGACATAGctctggtg < 2:259616/150‑8 (MQ=255) tctcGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACACCACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCTAGAGGGGGGACCTAGCAATGCTg < 2:553426/150‑1 (MQ=255) tctcGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTg < 1:1027386/150‑1 (MQ=255) tctcGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTg < 2:259615/150‑1 (MQ=255) aaTTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAGAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttga > 2:925140‑M2/1‑80 (MQ=255) aaTTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAGAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttga < 1:925140‑M2/87‑8 (MQ=255) gCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAGCGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTg > 2:594533/1‑134 (MQ=255) gCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTg < 1:594533/134‑1 (MQ=255) cAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCAtt < 2:668921/150‑1 (MQ=255) aGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTAc > 2:448668/1‑150 (MQ=255) cGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCg > 2:878174/1‑150 (MQ=255) ggTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGt > 2:1120217/1‑150 (MQ=255) cccTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAg < 1:616658/150‑1 (MQ=255) tCACGATCAAAAACGGCGGGGCAACCATTGCCCCACAACACAGCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGcac < 1:72828/150‑1 (MQ=255) tCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGcac > 1:259770/1‑150 (MQ=255) aCGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttgatcgtgagggttaccttgtctgcggcttgctgaatttctaccgagatcccgcttccgtccggcgtgtatcgaacggcattcgagagaatattgga < 1:844313‑M2/150‑102 (MQ=255) aTCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttgatcgtgagggttaccttgtctgcggcttgctgaatt < 1:765140‑M2/88‑43 (MQ=255) aTCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGAtttttgatcgtgagggttaccttgtctgcggcttgctgaatt > 2:765140‑M2/1‑46 (MQ=255) gggCAACCATTGACCCACAACACATCAACAAGAtttttgatcgtgagggttaccttgtctgcggcttgctgaatttctaccgagatcccgcttccgtccggcgtgtatcgaacggcattcgagagaatattggatacagctcggtcgatc > 2:844313‑M2/1‑33 (MQ=255) gggCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGt < 1:433111/150‑1 (MQ=255) aCCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCAcc > 2:1107037/1‑150 (MQ=255) tGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTc < 1:878174/150‑1 (MQ=255) aCCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCg > 2:313081/1‑103 (MQ=255) aCCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCg < 1:313081/103‑1 (MQ=255) acaacaCATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAgg > 1:743863/1‑150 (MQ=255) acaacaCATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGCGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAgg > 2:768642/1‑150 (MQ=255) caacaCATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAggg < 1:448668/150‑1 (MQ=255) aTCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAGGGGTTACa < 1:925091/150‑1 (MQ=255) tCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTg > 2:677987/1‑124 (MQ=255) tCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTg < 1:677987/124‑1 (MQ=255) tCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAGGGGTTACAg < 1:1107037/150‑1 (MQ=255) acaaGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAGGGGTTACAGCAt < 2:337550/150‑1 (MQ=255) | GCTGTATCCAATATTCTCTCGAATGCCGTTCGATACACGCCGGACGGAAGCGGGATCTCGGTAGAAATTCAGCAAGCCGCAGACAAGGTAACCCTCACGATCAAAAACGGCGGGGCAACCATTGACCCACAACACATCAACAAGATTTTTGATCGCTTCTACCGGGCCGACCCGGCAAGGCGAGAGGGGGGACCTAGCAATGCTGGGCTTGGTCTGGCCATTACCCGCTCCATCGTCAAAGCACATGATGGAAAAGTCTGGTGCACCTCGTCCGAAGGGGTTACAGCAT > NC_002947/6136781‑6137069 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |