New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1780109 =48 (0.970)13 (0.310) 13/226 2.5 25.7% intergenic (+26/+80) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
?NC_002947 1780171 = 34 (0.800)intergenic (+88/+18) PP_1587/dapC NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase

GGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTG  >  NC_002947/1779966‑1780250
                                                                                                                                               |                                                                                                                                             
ggCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGCGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGc                                                                                                                                         >  2:938046/1‑150 (MQ=255)
  ctgtcgcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGc                                                                                                                                             >  2:1144878‑M1/142‑144 (MQ=255)
  ctgtcgcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGc                                                                                                                                             <  1:1144878‑M1/3‑1 (MQ=255)
       gcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCcaca                                                                                                                                  <  2:998476‑M1/14‑1 (MQ=255)
       gcgtgaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCcaca                                                                                                                                  <  2:255376‑M1/14‑1 (MQ=255)
           gaagtggatggggtgaacccgggtgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagtgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTa                                                                                                                              >  1:618073‑M1/133‑150 (MQ=255)
                     cAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTActgcgctgcg                                                                                                                    >  2:288735/1‑150 (MQ=255)
                         cTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTg                                                                                                                >  1:754175/1‑150 (MQ=255)
                               cGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCa                                                                                                          <  2:751602/150‑1 (MQ=255)
                                gTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAg                                                                                                         >  1:875650/1‑150 (MQ=255)
                                gTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAACGGAGTCTGGGTTCAGTCACGTAGACCCTATCACGGACCTTCGTGGGCGCGTCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAg                                                                                                         <  1:288735/150‑1 (MQ=255)
                                  tgccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAgcg                                                                                                       >  2:588438‑M1/110‑150 (MQ=255)
                                    ccgggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCt                                                                                                     >  1:998476‑M1/108‑150 (MQ=255)
                                      gggcgcgtgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcgCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGt                                                                                                   <  2:348641‑M1/45‑1 (MQ=255)
                                          ggtggGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCt                                                                                               <  1:1178741/150‑1 (MQ=255)
                                             tgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCt                                                                                                     >  2:768‑M1/99‑141 (MQ=255)
                                             tgcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCt                                                                                                     <  1:768‑M1/43‑1 (MQ=255)
                                              gcgcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcgCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTgg                                                                                           >  1:348641‑M1/98‑150 (MQ=255)
                                               gggATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTggg                                                                                          >  2:1021595/1‑150 (MQ=255)
                                                gcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCca                                                                                                                                    <  2:8074‑M1/12‑1 (MQ=255)
                                                gcatggcactggttgcaccgctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCca                                                                                                                                    >  1:8074‑M1/96‑107 (MQ=255)
                                                    gAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCACTTCGCGGGCGCGCCCGCTCCCACAGGTACAGCGCTGATTTCAAGCGCAGCGCAGTACCTGTGGGAGCgg                                                                                     <  1:718972/150‑1 (MQ=21)
                                                       gtggtgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGATTGAAATCAGCGCTGTACCTGTGGGCGCGGGCg                                                                                  >  1:1251928/1‑150 (MQ=255)
                                                           tgCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGcc                                                                              <  2:875650/150‑1 (MQ=255)
                                                              ggCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTc                                                                                                                                       <  2:1145157/90‑1 (MQ=255)
                                                              ggCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTc                                                                                                                                       >  1:1145157/1‑90 (MQ=255)
                                                                    tACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCgg                                                                                     >  1:908061/1‑134 (MQ=255)
                                                                    tACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCgg                                                                                     <  2:908061/134‑1 (MQ=255)
                                                                    ctggccgaatgcatcgaagcggcggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcgCCCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGCACCTCTGGGAGCGGGCGTGCCCGCGAAggg                                                                     >  1:487799‑M1/76‑150 (MQ=255)
                                                                         ggTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGGATGGGACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGa                                                                >  1:697059/1‑150 (MQ=39)
                                                                         ggTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtgt                                                                                             >  2:760379/1‑121 (MQ=255)
                                                                         ggTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtgt                                                                                             <  1:760379/121‑1 (MQ=255)
                                                                                    tatTAGTGGGTCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGtttt                                                     >  2:996184/1‑150 (MQ=255)
                                                                                    tatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTActgcgctgc                                                                                                                     >  1:1074303/1‑86 (MQ=255)
                                                                                    tatGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTActgcgctgc                                                                                                                     <  2:1074303/86‑1 (MQ=255)
                                                                                        agtgagGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCCGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAg                                                 <  1:1021595/150‑1 (MQ=255)
                                                                                           ggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGcc                                                                                                                                            <  1:40012‑M1/4‑1 (MQ=255)
                                                                                           ggagcgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGcc                                                                                                                                            >  2:40012‑M1/53‑56 (MQ=255)
                                                                                           gagGCCAACCTGGGTTCAGTCCAGTAGTCCCTATCAAGGCCCTTCGCTGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGTTTGAAATCAGCGCTGTACCTGTGGGCGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGaa                                              <  2:921919/150‑1 (MQ=38)
                                                                                             ggCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAgg                                            >  2:384420/1‑150 (MQ=255)
                                                                                               cgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCca                                                                                                                                    <  2:1097803‑M1/12‑1 (MQ=255)
                                                                                               cgcattcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCca                                                                                                                                    >  1:1097803‑M1/49‑60 (MQ=255)
                                                                                                gAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGgcgc                                         >  2:1167730/1‑150 (MQ=255)
                                                                                                  attcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCCAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtgtg                                                                                            >  1:855984‑M1/46‑96 (MQ=255)
                                                                                                  attcgcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCCAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtgtg                                                                                            <  2:855984‑M1/51‑1 (MQ=255)
                                                                                                   ccTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGaa                                      >  1:678924/1‑150 (MQ=255)
                                                                                                    cTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCt                                                                                                                                        <  1:1064004/51‑1 (MQ=255)
                                                                                                    cTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCt                                                                                                                                        >  2:1064004/1‑51 (MQ=255)
                                                                                                    cTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAAt                                     <  1:939144/150‑1 (MQ=255)
                                                                                                      gcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtg                                                                                              <  1:397090‑M1/50‑1 (MQ=255)
                                                                                                      gcgccttcctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCtg                                                                                              >  2:397090‑M1/42‑91 (MQ=255)
                                                                                                       ggTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATgc                                   >  1:288263/1‑149 (MQ=255)
                                                                                                       ggTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATgc                                   <  2:288263/149‑1 (MQ=255)
                                                                                                        gTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGACCGCTCCCAAAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGCGCGTGCTCGCGACGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGACTgcgc                                 >  1:397379/1‑150 (MQ=255)
                                                                                                             gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAgcg                                                                                                       >  2:1188967/1‑75 (MQ=255)
                                                                                                             gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAgcg                                                                                                       <  1:1188967/75‑1 (MQ=255)
                                                                                                             gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGtt                                                       <  2:499456/123‑1 (MQ=255)
                                                                                                             gTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGtt                                                       >  1:499456/1‑123 (MQ=255)
                                                                                                              ctgcaaaaccgctgatcaaccccttcgcggggaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTAc                                                                                                 <  2:777165‑M1/47‑1 (MQ=255)
                                                                                                              ctgcaaaaccgctgatcaaccccttcgcgggcaCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTAc                                                                                                 >  1:777165‑M1/34‑80 (MQ=255)
                                                                                                                aaGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCcgccgc                         >  2:727431/1‑150 (MQ=255)
                                                                                                                      aCCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGCAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCATGATGGCGCGAACCCGCTCGGCCGCGTCTAt                   >  2:66328/1‑150 (MQ=37)
                                                                                                                          tATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAg                                                                                                                                 >  2:984419/1‑36 (MQ=255)
                                                                                                                            tCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTc             <  1:727431/150‑1 (MQ=255)
                                                                                                                              aaGGCCCTGCGCGGGCGCGCCCGCTCCGAGAGGTACTGCGGTGCGATTGAAATGCGCGCTGTACCTGGGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCgg           <  2:1251928/150‑1 (MQ=255)
                                                                                                                                 gCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCa        >  1:1104771/1‑150 (MQ=255)
                                                                                                                                    cTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCg     <  1:430326/150‑1 (MQ=255)
                                                                                                                                    cTTCGCGGGCGCGCCCGCACCCAGAGGTACTGCGCTGCGCTTGAAATCACCGCTGTACCTGTAGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAACGCGCGAATGCGCTCCGCCGCTTCGATGCCTTCGGCCAGCg     >  2:258934/1‑150 (MQ=39)
                                                                                                                                     ttCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCgg    >  1:497301/1‑150 (MQ=255)
                                                                                                                                       cgcgGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTg  <  2:754175/150‑1 (MQ=255)
                                                                                                                                              gcgcCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATgc                                   >  2:705123/1‑110 (MQ=255)
                                                                                                                                              gcgcCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATgc                                   <  1:705123/110‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                             
GGCGCAGCGGTTGGAGCTGTACAACCTGCATCGTCAGCACCTGGTGGGGGATGAGGTGGTGCGGCAAGTACTGGGTGAGCTGGATATGAGTGAGGCGAACCTGGGTTCAGTCAAGTAGACCCTATCAAGGCCCTTCGCGGGCGCGCCCGCTCCCACAGGTACTGCGCTGCGCTTGAAATCAGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGTTGATCAGCGGTTTTGCAGGAAGGCGCGAATGCGCTCCGCCGCTTCGATGCATTCGGCCAGCGGTG  >  NC_002947/1779966‑1780250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.