| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4740864 = | 52 (0.820) | 18 (0.340) | 21/224 | 2.0 | 31.6% | intergenic (+55/+697) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| ? | NC_002947 | 4740910 = | 34 (0.640) | intergenic (+101/+651) | gltA/yeiW | citrate synthase/putative oxidoreductase | |||||
CACACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4741030‑4740864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgaagaggccggcacagACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCAGTGCT > NC_002947/4740910‑4741054 CACACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGATGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCG < 1:342295/150‑1 ACACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGC > 2:1200355/1‑150 ACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGGCGGTCGAGGGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGAACTCTTAGCGGGCGAGGCCGCGg > 1:879811/1‑149 ACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGA > 1:757255/1‑150 CCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAA < 1:533376/150‑1 CGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAG < 1:957483/150‑1 GAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGA < 1:1206068/150‑1 GAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGA < 2:1094348/150‑1 GAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGA < 1:1200355/150‑1 AGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAG < 2:757255/150‑1 CCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGC < 2:761888/150‑1 AGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCG < 1:497492/150‑1 CGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGC > 2:48762/1‑143 CGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGC < 1:48762/143‑1 GTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCC < 1:1297323/116‑1 GTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCC > 2:1297323/1‑116 GCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCG > 2:1187782/1‑102 GCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCG < 1:1187782/102‑1 AATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGC > 2:231234/1‑93 AATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGC < 1:231234/93‑1 ACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGC < 2:332815/90‑1 ACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGC > 1:332815/1‑90 GCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGAC < 2:819890/89‑1 GCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGAC > 1:819890/1‑89 TCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTC > 1:580497/1‑150 TCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCG > 2:392027/1‑131 TCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCG < 1:392027/131‑1 CTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCG < 2:497492/150‑1 CTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCG > 2:1432924/1‑150 TTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGG > 1:453152/1‑150 TTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCC > 1:794105/1‑62 TTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCC < 2:794105/62‑1 TTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCC > 1:429023/1‑59 TTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCC < 2:429023/59‑1 GCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGTTATTGAA > 2:815929/1‑88 GCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGTTATTGAA < 1:815929/88‑1 GCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAG > 1:763583/1‑75 GCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAG < 2:763583/75‑1 CAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAA > 2:298258/1‑83 CAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAA < 1:298258/83‑1 CCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCAC > 1:593058/1‑90 CCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCAC < 2:593058/90‑1 CCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAA > 2:1520529/1‑78 CCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAA < 1:1520529/78‑1 GCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGG > 1:1316650/1‑150 GCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCA < 2:580497/150‑1 GGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCAGTG < 1:761888/150‑1 GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCGTCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCAGTGCT < 2:1040250/146‑1 GACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCGTCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCAGTGCT > 1:1040250/1‑146 CACACCGAGCCAGGTGGTAGCGTGCCGGCGATGGTGGCCAACAAGTTCGTGGTGGATGCGCCGTTCAATACCCTGAAAGGGCTGCGTGAGCGGGCGGAGAAAAACTGAGGTTTTGTGGTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4741030‑4740864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgaagaggccggcacagACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTACCACCTGGCTCGGTGTGCACCTGGTAGGTCACTTCAGTGCT > NC_002947/4740910‑4741054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |