New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4740864 =52 (0.820)18 (0.340) 21/224 2.0 31.6% intergenic (+55/+697) gltA/yeiW citrate synthase/putative oxidoreductase
?NC_002947 4740910 = 34 (0.640)intergenic (+101/+651) gltA/yeiW citrate synthase/putative oxidoreductase

GCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTA  >  NC_002947/4740719‑4741013
                                                                                                                                                 |                                                                                                                                                     
agcactgaagtgacctaccaggtgcacaccgagccaggtggtagcgtgccggcgacggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtc                                                                                                                                                       >  1:1040250‑M1/146‑146 (MQ=255)
agcactgaagtgacctaccaggtgcacaccgagccaggtggtagcgtgccggcgacggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtc                                                                                                                                                       <  2:1040250‑M1/1‑1 (MQ=255)
  cactgaagtgacctaccaggtgcacaccgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGcc                                                                                                                                                 <  1:761888‑M1/7‑1 (MQ=255)
   ctcCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCg                                                                                                                                                >  2:201957/1‑150 (MQ=255)
     tgaagtgacctaccaggtgcacaccgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGc                                                                                                                                              <  2:580497‑M1/10‑1 (MQ=255)
             cctaccaggtgcacaccgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTcgc                                                                                                                                      >  1:1316650‑M1/133‑150 (MQ=255)
               cAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCgg                                                                                                                                    >  1:1418547/1‑150 (MQ=255)
               cAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCgg                                                                                                                                    >  2:1362716/1‑150 (MQ=255)
                           tCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGa                                                                                                                        >  1:1546319/1‑150 (MQ=255)
                            ccgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa                                                                                                                       >  1:453152‑M1/118‑150 (MQ=255)
                             cgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAag                                                                                                                      <  2:497492‑M1/34‑1 (MQ=255)
                             cgagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAag                                                                                                                      >  2:1432924‑M1/117‑150 (MQ=255)
                              gcgcCAGCTGTACACCGGTGTTGATAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGTAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     <  1:863522/150‑1 (MQ=255)
                              gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag                                                                                                                    <  2:532730/150‑1 (MQ=38)
                              gagccaggtggtagcgtgccggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     >  1:580497‑M1/116‑150 (MQ=255)
                               cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag                                                                                                                    <  1:586/150‑1 (MQ=39)
                                  cAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGcc                                                                                                                 <  2:1408947/150‑1 (MQ=255)
                                   aGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCg                                                                                                                <  2:679904/150‑1 (MQ=255)
                                     cTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGc                                                                                                              >  1:1165256/1‑150 (MQ=255)
                                           acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTcc                                                                                                                                                       <  1:44053/103‑1 (MQ=255)
                                           acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTcc                                                                                                                                                       >  2:44053/1‑103 (MQ=255)
                                           acCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGac                                                                                                        >  2:691256/1‑150 (MQ=255)
                                             cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGacac                                                                                                      <  2:1165256/150‑1 (MQ=255)
                                             cGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGacac                                                                                                      >  2:598373/1‑150 (MQ=255)
                                               gCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGAcacca                                                                                                    <  2:1546319/150‑1 (MQ=255)
                                                 cggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     <  1:392027‑M1/35‑1 (MQ=255)
                                                 cggcgatggtggccaacaagttcgtggtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     >  2:392027‑M1/97‑131 (MQ=255)
                                                    cAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGTAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACaaaa                                                                                               <  2:761082/150‑1 (MQ=255)
                                                    cAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACaaaa                                                                                               <  1:1362716/150‑1 (MQ=255)
                                                           gcgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag                                                                                                                    <  1:229686/122‑1 (MQ=38)
                                                           gcgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag                                                                                                                    >  2:229686/1‑122 (MQ=38)
                                                            cgACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGtt                                                                                       <  1:1217262/150‑1 (MQ=255)
                                                              aCATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGtttt                                                                                     >  1:1377497/1‑150 (MQ=255)
                                                                 tCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTtct                                                                                  >  2:1003738/1‑150 (MQ=255)
                                                                    ttGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     >  2:599946/1‑112 (MQ=255)
                                                                    ttGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga                                                                                                                     <  1:599946/112‑1 (MQ=255)
                                                                      gCCATGAAAGACCGCAAGCAAGCTGCAGTAGCCGAACGTAAGAAGGCTGCCCTCGGGCAGCTTTTTTTATTTGTCCTTTGCCAGCCTCCTGGCGCCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAATACCTCAGTTTTTCTacgcc                                                                             <  2:529897/150‑1 (MQ=255)
                                                                          tGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTccgcccgcc                                                                         >  2:879811/1‑149 (MQ=255)
                                                                           gtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCgg                                                                                                                                    >  1:593058‑M1/71‑90 (MQ=255)
                                                                           gtggatgcgccgttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCgg                                                                                                                                    <  2:593058‑M1/20‑1 (MQ=255)
                                                                            aaaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc                                                                                                                  >  2:197281/1‑107 (MQ=255)
                                                                            aaaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc                                                                                                                  <  1:197281/107‑1 (MQ=255)
                                                                                  cGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGc                                                                 <  1:691256/150‑1 (MQ=255)
                                                                                       ttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCgg                                                                                                                                    <  1:1520529‑M1/20‑1 (MQ=255)
                                                                                       ttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCgg                                                                                                                                    >  2:1520529‑M1/59‑78 (MQ=255)
                                                                                       ttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTg                                                                                                                               >  2:298258‑M1/59‑83 (MQ=255)
                                                                                       ttcaataccctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTg                                                                                                                               <  1:298258‑M1/25‑1 (MQ=255)
                                                                                       ttcaataacctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc                                                                                                                          <  1:815929‑M1/30‑1 (MQ=255)
                                                                                       ttcaataacctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc                                                                                                                          >  2:815929‑M1/59‑88 (MQ=255)
                                                                                          aGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAg                                                         <  2:1418547/150‑1 (MQ=255)
                                                                                             tGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg                                                        <  2:846064/148‑1 (MQ=255)
                                                                                             tGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg                                                        >  1:846064/1‑148 (MQ=255)
                                                                                                ctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGc                                                                                                                              <  2:763583‑M1/26‑1 (MQ=255)
                                                                                                ctgaaagggctgcgtgagcgggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGc                                                                                                                              >  1:763583‑M1/50‑75 (MQ=255)
                                                                                                 gTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGa                                                                                                         <  2:1291880/95‑1 (MQ=255)
                                                                                                 gTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGa                                                                                                         >  1:1291880/1‑95 (MQ=255)
                                                                                                       gAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc                                            >  2:1298898/1‑150 (MQ=255)
                                                                                                       gAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc                                            <  1:1003738/150‑1 (MQ=255)
                                                                                                        aaCGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgcg                                           <  1:201957/150‑1 (MQ=255)
                                                                                                        aaCGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGACGGCACAGAcacca                                                                                                    <  2:885807/93‑1 (MQ=255)
                                                                                                        aaCGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGACGGCACAGAcacca                                                                                                    >  1:885807/1‑93 (MQ=255)
                                                                                                                aagGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCt                                                                                                                                                      <  1:789854/35‑1 (MQ=255)
                                                                                                                aagGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCt                                                                                                                                                      >  2:789854/1‑35 (MQ=255)
                                                                                                                aagGCTGCCCGAGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGTGTATTGAACGGCGCATccacc                                   >  1:1278180/1‑150 (MQ=255)
                                                                                                                  ggCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa                                                          >  2:17565/1‑125 (MQ=255)
                                                                                                                  ggCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa                                                          <  1:17565/125‑1 (MQ=255)
                                                                                                                    ggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa                                                                                                                       >  1:794105‑M1/30‑62 (MQ=255)
                                                                                                                    ggcggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa                                                                                                                       <  2:794105‑M1/33‑1 (MQ=255)
                                                                                                                       ggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa                                                                                                                       <  2:429023‑M1/33‑1 (MQ=255)
                                                                                                                       ggagaaaaactgaggttttgtggtgtCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa                                                                                                                       >  1:429023‑M1/27‑59 (MQ=255)
                                                                                                                       cccTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACt                            >  2:1272805/1‑150 (MQ=255)
                                                                                                                        ccTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa                                                          >  2:236325/1‑119 (MQ=255)
                                                                                                                        ccTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCa                                                          <  1:236325/119‑1 (MQ=255)
                                                                                                                                  ccTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAGGGGGGCATCCACCACGAACTTGTTGGccacc                 >  2:1038794/1‑150 (MQ=255)
                                                                                                                                     tttttATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATc              <  1:285591/150‑1 (MQ=255)
                                                                                                                                          aTTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACgg                                             <  1:1121542/114‑1 (MQ=255)
                                                                                                                                          aTTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACgg                                             >  2:1121542/1‑114 (MQ=255)
                                                                                                                                               gtCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGc                                                                 <  2:819890‑M1/87‑1 (MQ=255)
                                                                                                                                               gtCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGc                                                                 >  1:819890‑M1/3‑89 (MQ=255)
                                                                                                                                                 cTGTGCCGGCCTCTTCGCGGCATTGTCGGCGAAGAGTCCGTCACAGACACCACAAAAGCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAAAAGCAAATCCACGACGAACTTTTTGGCTAAAATCGCCGGCACGCTa  >  1:759536/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCTGCCCTCGGGCAGCCTTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGCCACCATCGCCGGCACGCTA  >  NC_002947/4740719‑4741013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.