New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 461367	45 (0.920)	3 (0.070)	3/234	NT	6.4%	coding (1101/2301 nt)	pqqF	coenzyme PQQ synthesis protein F
	?	NC_002947	= 461389	46 (1.000)					coding (1079/2301 nt)	pqqF	coenzyme PQQ synthesis protein F

GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/461216‑461367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaagcTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA  <  NC_002947/461389‑461242                                                                                                                                                                                                                                                                                                              GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGGGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATAGTCGGCACCTGGCAGGCTTTCCAGCAGGCCGCCAA                                                                                                                                                        >  2:932323/1‑150                                        GCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCT                                                                                                                 <  2:61112/150‑1                                                    CCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGC                                                                                                                         <  1:557317/130‑1                                                    CCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGC                                                                                                                         >  2:557317/1‑130                                                                     TCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC                                                                                                                                                      >  1:741147/1‑84                                                                     TCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC                                                                                                                                                      <  2:741147/84‑1                                                                                                                                                  GCCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCG       >  2:625868/1‑150                                                                                                                                                   CCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCGAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTAAACGCATGTCTAAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGC      >  2:304422/1‑150                                                                                                                                                   CCAAGCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGC      >  2:160264/1‑150                                                                                                                                                       GCTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA  <  1:756869/150‑1                                                                                                                                                                                                                                                                                                              GCGCGGGCGGAAGCTGGTCACTGATCTTCAGCGCTGCCGGCAGCGGTTGCGCCTTGGCATGGGGCAGGTCAGCCTTCAGCAATGGGTCGACTGGCAGCAGCTGCCAATCGCCATGGTCGGCACCTGGCAGGCTTTCCAGCAGGGCGCCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/461216‑461367 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaagcTGGATACCCAAGGGTTGCAGGCGCTTGGCGCCCTGCTGGAAAGCCTGCCAGGTGCCGACCATGGCGATTGGCAGCTGCTGCCAGTCGACCCATTGCTGAAGGCTGACCTGCCCCATGCCAAGGCGCAACCGCTGCCGGCAGCGCTGAA  <  NC_002947/461389‑461242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.