New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 625064	27 (0.550)	3 (0.070)	5/232	NT	10.2%	intergenic (‑155/+28)	PP_0537/ppa	transcriptional regulator/inorganic pyrophosphatase
	?	NC_002947	= 625068	28 (0.620)					intergenic (‑159/+24)	PP_0537/ppa	transcriptional regulator/inorganic pyrophosphatase

TGGCGGCGAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/624909‑625064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccccgcTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCCGCCGCT  <  NC_002947/625068‑624922                                                                                                                                                                                                                                                                                                                 TGGCGGCGAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAA                                                                                                                                                           <  1:1089478/150‑1     GGCGAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCC                                                                                                                                                       <  2:690310/150‑1       CGAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGC                                                                                                                                                     <  2:1162703/150‑1                      GTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAGAAACCCCGCTTTGGCGGGGTTTTT                                                                                                                                      <  2:452002/150‑1                                                                                                                                        TTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTA                                                  >  1:853737/1‑120                                                                                                                                        TTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTA                                                  <  2:853737/120‑1                                                                                                                                               ATGAAAAACCCCGCCAAAGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTC                                                                                     >  1:1080477/1‑78                                                                                                                                               ATGAAAAACCCCGCCAAAGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTC                                                                                     <  2:1080477/78‑1                                                                                                                                                    AAACCCCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCC        >  1:791633/1‑150                                                                                                                                                      cCCCCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCCGC      <  2:537189/149‑1                                                                                                                                                        CCCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGC                                                             >  1:659071/1‑93                                                                                                                                                        CCCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGC                                                             <  2:659071/93‑1                                                                                                                                                         CCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCCGCCGC   >  1:209222/1‑150                                                                                                                                                         CCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACT                <  1:563578/137‑1                                                                                                                                                         CCGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACT                >  2:563578/1‑137                                                                                                                                                          CGCTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCCGCCGCT  <  1:230293/150‑1                                                                                                                                                                                                                                                                                                                 TGGCGGCGAGTGTAGCGGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/624909‑625064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccccgcTTTGGCGGGGTTTTTCATGCCTGAATGGAACGCGCTCACTGCTGGGAACAAATCCTACACAGTCCTACACCAGCATCCTACAAACAGCCTCTTTTCGTACAAATCCCGTCAACACCCGGTTCATTTCCTTACTGGCAACCCGCCGCT  <  NC_002947/625068‑624922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.