New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 942551 | NA (NA) | 3 (0.070) | 3/234 | NT | 9.1% | coding (3074/18933 nt) | PP_0806 | surface adhesion protein |
? | NC_002947 | = 942587 | 32 (0.650) | coding (3038/18933 nt) | PP_0806 | surface adhesion protein |
TTCGCCGTCAACTTGTGGCGGGTTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCtcaccgcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/942403‑942551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGCCCGACCGGCGTGTTCAGC < NC_002947/942587‑942436 TTCGCCGTCAACTTGTGGCGGGTTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCT > 2:680334/1‑150 CCGTCAACTTGTGGCGGGTTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACC < 2:794404/150‑1 GTCAACTTGTGGCGGGTTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGC < 2:371433/150‑1 TTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGC > 1:192178/1‑134 TTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGC < 2:192178/134‑1 CACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGC < 2:598491/150‑1 CACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCG < 1:313867/131‑1 CACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCG > 2:313867/1‑131 CCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGGCCGACCa < 1:604878/135‑2 CCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGGCCGACCa > 2:604878/1‑134 CCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGCCCGACCGGCGTGTTCAGC > 1:388314/1‑146 CCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGCCCGACCGGCGTGTTCAGC < 2:388314/146‑1 TTCGCCGTCAACTTGTGGCGGGTTGAGGTTGAGGCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCtcaccgcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/942403‑942551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGCGTTATCACCGGCCGTGCCGAACCGGGCAGCACCGTGCGCATCGTGGCTGCCGACGGAACCGAACTGGGCACTGCCGTGGTCGGCCCGACCGGCGTGTTCAGC < NC_002947/942587‑942436 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |