New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 942551	NA (NA)	3 (0.070)	3/234	NT	9.1%	coding (3074/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 942587	32 (0.650)					coding (3038/18933 nt)	PP_0806	surface adhesion protein

GCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAG  >  NC_002947/942436‑942697                                                                                                                    |                                                                                                                                                   gCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGG                                                                                                                      <  2:388314‑M2/146‑1 (MQ=255) gCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGG                                                                                                                      >  1:388314‑M2/1‑146 (MQ=255)            tggtCGGCCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGG                                                                                                                      >  2:604878‑M2/2‑135 (MQ=255)            tggtCGGCCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGG                                                                                                                      <  1:604878‑M2/134‑1 (MQ=255)                                                                        ggctgcCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCcagca                                           <  1:1089581/149‑1 (MQ=17)                                                                           tgcCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGtt                                        <  2:1009159/150‑1 (MQ=32)                                                                           tgcCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGtt                                        >  1:959019/1‑150 (MQ=32)                                                                            gcCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTc                                       <  1:610591/150‑1 (MQ=32)                                                                              ccGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGc                                     >  1:1234556/1‑150 (MQ=32)                                                                                ggTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCg                                   >  1:126545/1‑150 (MQ=32)                                                                                      gCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGGAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCt                             >  1:651124/1‑150 (MQ=17)                                                                                        aCGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTtg                           >  2:645585/1‑150 (MQ=32)                                                                                           gCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGAGGCCGGGGCGGTGCTCTCGGGTGTGCGGGTCTGTTTGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGc                        <  2:1109565/150‑1 (MQ=11)                                                                                             cGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCgg                      >  1:830203/1‑150 (MQ=32)                                                                                             cGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCgg                      >  2:778434/1‑150 (MQ=32)                                                                                               gTGATAACGCTGCCGTCCGCGCTCACCGCCAGGTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGAGGGCGGCGACGCAGCTCGGGCCATATGTTTGGCGACCACGTCCAGCAGTTCGCCCTTGGCTTGTGCGGGa                    <  2:1008850/150‑1 (MQ=11)                                                                                                 gatctcGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCATGGGCTATGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGAtt                  <  2:359027/145‑1 (MQ=255)                                                                                                    aaCGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAg               <  2:266779/150‑1 (MQ=32)                                                                                                      cGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGtt             <  2:527987/150‑1 (MQ=32)                                                                                                       gCTGCCGTCCGCGCTCACCGCCGGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTc            >  1:840083/1‑150 (MQ=17)                                                                                                       gCTGCCGTCCGCGCTCACCGCCAGTTAGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCGAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAgatc            >  1:359027/1‑147 (MQ=12)                                                                                                       gCTGCCGTCCGCGCTCACCGCCAGAACGGTCGGTGCGGCAGGGGCGGTGGTTTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTCAGCTTGTGCGGGATTCAGTTc            >  2:352167/1‑150 (MQ=11)                                                                                                        cTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCg           >  2:863597/1‑150 (MQ=32)                                                                                                         tGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGa          >  1:787988/1‑150 (MQ=32)                                                                                                          gCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGAt         <  2:131153/150‑1 (MQ=32)                                                                                                              tCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTg     >  2:1191494/1‑150 (MQ=32)                                                                                                               ccGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGc                        >  2:1078356/1‑130 (MQ=33)                                                                                                               ccGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGc                        <  1:1078356/130‑1 (MQ=33)                                                                                                                 gcgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGAgcgcggacggcagcgttatcaccggccgtgccgaaccgggcagcaccgtgcgcatcgtggctgccgacggaaccgaactgggcactgccgtggtcggcccgaccggcgtg  <  2:598491‑M2/150‑111 (MQ=255)                                                                                                                  cgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGAgcgcggacggcagcgttatcaccggccgtgccgaaccgggcagcaccgtgcgcatcgtggctgccgacggaaccgaactgggcactgccgtg                    >  2:313867‑M2/1‑39 (MQ=255)                                                                                                                  cgcTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGAgcgcggacggcagcgttatcaccggccgtgccgaaccgggcagcaccgtgcgcatcgtggctgccgacggaaccgaactgggcactgccgtg                    <  1:313867‑M2/131‑93 (MQ=255)                                                                                                                    |                                                                                                                                                   GCTGAACACGCCGGTCGGGCCGACCACGGCAGTGCCCAGTTCGGTTCCGTCGGCAGCCACGATGCGCACGGTGCTGCCCGGTTCGGCACGGCCGGTGATAACGCTGCCGTCCGCGCTCACCGCCAGTTCGGTCGGTGCGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAG  >  NC_002947/942436‑942697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.