| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1096700 | 52 (1.060) | 4 (0.080) | 4/240 | NT | 7.3% | coding (267/726 nt) | lptB | ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 1096707 | 51 (1.080) | coding (260/726 nt) | lptB | ABC transporter ATP‑binding protein | |||||
CAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1096549‑1096700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagCCTCGA‑TCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTCGATCGGGACGGCCGCCGCAAAGAGCTGGAAAGCCTGCTGCAGGAGTTCCACATCAGCCACATCCGGGACAACCTCGG < NC_002947/1096707‑1096563 CAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTAGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGA > 1:505374/1‑150 GAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGCCTCGA‑TCTTCCGCAA < 1:242552/77‑1 GAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGCCTCGA‑TCTTCCGCAA > 2:242552/1‑77 CGACAGCTTGCGGAAG‑ATCGAGGCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCT < 1:510044/83‑1 CGACAGCTTGCGGAAG‑ATCGAGGCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCT > 2:510044/1‑83 GGAAGCCTCGA‑TCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTCGATCGGGACGGCCGCCGCAAAGAGCTGGAAAGCCTGCTGCAGGAGTTCCACATCAGCCACATCCGGGACAACCTCGG < 1:676640/150‑1 CAGACAGGCTCATGCCGAGGTTGTCCCGGATGTGGCTGATGTGGAACTCCTGCAGCAGGCTTTCCAGCTCTTTGCGGCGGCCGTCCCGATCGAGGTCCTTGCGGGTCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1096549‑1096700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagCCTCGA‑TCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTCGATCGGGACGGCCGCCGCAAAGAGCTGGAAAGCCTGCTGCAGGAGTTCCACATCAGCCACATCCGGGACAACCTCGG < NC_002947/1096707‑1096563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |