New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1768955 | 38 (0.770) | 4 (0.080) | 4/240 | NT | 8.8% | coding (38/381 nt) | PP_5475 | hypothetical protein |
? | NC_002947 | = 1768978 | 46 (0.980) | coding (61/381 nt) | PP_5475 | hypothetical protein |
GCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768803‑1768955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaCATGCGGCCACAGTCGGCCGCCCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCA < NC_002947/1768978‑1768833 GCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTTGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGT > 2:948423/1‑150 CTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGA‑GGGCGGCCACAGTCGGCCGCCC < 1:573654/150‑1 CGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGACATGCGGCCACAGTCGGCCGCCCTCGACGTA < 2:161425/150‑1 AACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGACATGCGGCCACAGTCGGCCGCCCTCGACGTAG < 1:882125/96‑1 AACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGACATGCGGCCACAGTCGGCCGCCCTCGACGTAG > 2:882125/1‑96 TCGACATGCGGCCTCTTTCGGCCGCCCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCA < 2:1036650/150‑1 ACATGCGGCCACAGTCGGCCGCCCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCG < 1:966986/140‑1 ACATGCGGCCACAGTCGGCCGCCCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCG > 2:966986/1‑140 GCGGCTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768803‑1768955 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgaCATGCGGCCACAGTCGGCCGCCCTCGACGTAGGCGCCGAGGGTGTATTTATCGATGTTCATAGGTAGCGCAGCCCTGGGAATTCGTTGAGGTTGTACGTATTGCGTGGCCACCGGGTATCGAGCAGGTCGAAGTAGCCGGCGGTCA < NC_002947/1768978‑1768833 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |