New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1768955 | 38 (0.770) | 4 (0.080) | 4/240 | NT | 8.8% | coding (38/381 nt) | PP_5475 | hypothetical protein |
? | NC_002947 | = 1768978 | 46 (0.980) | coding (61/381 nt) | PP_5475 | hypothetical protein |
CTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTGCGCGGGCCTGCGAAGAGATGATCCAGAC > NC_002947/1768807‑1769102 | cTCCCTTACGTCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAg < 2:1102491/150‑1 (MQ=255) tCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAgg < 2:304770/150‑1 (MQ=255) cGTTCCGGCTGCCCAGGTCTCGGTGACCGCCGGCTTCTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGggc < 2:348320/150‑1 (MQ=255) cTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTTGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACt < 1:948423/150‑1 (MQ=255) cTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACt > 2:664781/1‑150 (MQ=255) cTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACt < 1:181228/150‑1 (MQ=255) tGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGccacagt > 2:574707/1‑145 (MQ=255) cccAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACAGCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACtgtg < 2:890381/150‑1 (MQ=255) ccAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTgg > 2:822703/1‑150 (MQ=255) ctcGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAgggcggccacagtcggccgccc < 1:573654‑M1/150‑23 (MQ=255) tGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGAAAGAGGCCGCATGtcga < 2:1036650‑M2/150‑5 (MQ=255) cgccgGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAcatgcggccacagtcggccgccctcgacgta < 2:161425‑M1/150‑32 (MQ=255) cgGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGt > 2:966986‑M2/1‑139 (MQ=255) cgGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGt < 1:966986‑M2/140‑2 (MQ=255) tACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGc < 1:1036650/150‑1 (MQ=255) ttCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTgg > 2:1107519/1‑150 (MQ=255) tGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGa > 2:1064167/1‑150 (MQ=255) gCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCAACGGGCTGTTGCTGGAg < 2:1244835/150‑1 (MQ=255) ccGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGgcgc > 2:230125/1‑150 (MQ=255) aCGCAATACGTACCACCTCAACGAATTCCCAGGGCTGCGCTACCTATAAACATCGATAAATACACGCTCGGCTCCTACGTCGAGGGCGATCGACTGTGACCGCATGTCGACTGCTACGGGCTGGTTCTGGAGGTTAGGCGCGACCTGGGc > 2:407444/1‑150 (MQ=255) aCGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGc > 2:936379/1‑150 (MQ=255) atctccTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTg < 1:530910/146‑1 (MQ=255) aaCCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGc < 1:594149/150‑1 (MQ=255) aCCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACCCACTCGGCGCCTACGTCGAGGGCGGCAGACTCTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGcc < 2:144757/150‑1 (MQ=255) cTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTGCTGTGCAGCCTGGGCTTCCCGGACTggagct > 2:530910/1‑146 (MQ=255) aaCGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAcatgcggccacagtcggccgccctcgacgtag < 1:882125‑M1/96‑33 (MQ=255) aaCGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAcatgcggccacagtcggccgccctcgacgtag > 2:882125‑M1/1‑64 (MQ=255) aCGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTg < 1:1107519/150‑1 (MQ=255) gAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTggg < 2:987294/150‑1 (MQ=255) aTTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCa < 1:1046014/150‑1 (MQ=255) ccAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCagagc > 2:528444/1‑149 (MQ=255) ccAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAgaga > 2:1086073/1‑150 (MQ=255) gCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATgcgc > 2:714525/1‑150 (MQ=255) cTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCa > 1:644114/1‑150 (MQ=255) cgcTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCg < 1:1174204/100‑1 (MQ=255) cgcTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCg > 2:1174204/1‑100 (MQ=255) aCCTATGAACATAGATAAAGACCACCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGCTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGa < 1:620664/150‑1 (MQ=255) ccTATGAACATCGATAAATCCACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACCGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGTAGTGGGCAGAGATGCGCAAGGCGGAt < 1:494825/150‑1 (MQ=255) tATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATgg > 1:1027341/1‑150 (MQ=255) tGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATggcg < 2:1076827/150‑1 (MQ=255) aTAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTgcgc > 2:806508/1‑150 (MQ=255) acCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGAGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTGCGCGGGCCTGc > 2:905243/1‑150 (MQ=255) ggCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTGCGCGGGCCTGCGAagag > 2:733519/1‑150 (MQ=255) gcCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCttt > 2:1127337/1‑129 (MQ=255) gcCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCttt < 1:1127337/129‑1 (MQ=255) cTACGTCGAGGGCGGCCGACTGTGGCCGCATGtcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgtt > 2:882125‑M2/1‑32 (MQ=255) cTACGTCGAGGGCGGCCGACTGTGGCCGCATGtcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgtt < 1:882125‑M2/96‑65 (MQ=255) cTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCg < 1:1069986/115‑1 (MQ=255) cTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCg > 2:1069986/1‑115 (MQ=255) cTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGGGGGCAGAGATGGGCAAGGAGGATGGCGGCTTTTCGCGGGCCTGCGAAGAaataat > 1:381337/1‑150 (MQ=255) tACGTCGAGGGCGGCCGACTGTGGCCGCATGtcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgttgaggttgtacgtattgcgtggccaccgggtatcgagcaggtcgaagtagccggcg < 2:161425‑M2/150‑120 (MQ=255) tCGAcatgcggcctctttcggccgccctcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgttgaggttgtacgtattgcgtggccaccgggtatcgagcaggtcgaagtagccggcggtca < 2:1036650‑M1/150‑147 (MQ=255) cGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTGCGCGGGCCTGCGAAGAGATGATCCAGAc < 1:936379/150‑1 (MQ=255) acatgcggccacagtcggccgccctcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgttgaggttgtacgtattgcgtggccaccgggtatcgagcaggtcgaagtagccg < 1:966986‑M1/140‑140 (MQ=255) acatgcggccacagtcggccgccctcgacgtaggcgccgagggtgtatttatcgatgttcataggtagcgcagccctgggaattcgttgaggttgtacgtattgcgtggccaccgggtatcgagcaggtcgaagtagccg > 2:966986‑M1/1‑1 (MQ=255) | CTCCGTTACGGCTGCCCAGGTCTCGGTGACCGCCGGCTACTTCGACCTGCTCGATACCCGGTGGCCACGCAATACGTACAACCTCAACGAATTCCCAGGGCTGCGCTACCTATGAACATCGATAAATACACCCTCGGCGCCTACGTCGAGGGCGGCCGACTGTGGCCGCATGTCGACTGCTACGGGCTGGTGCTGGAGGTTCGGCGCGACCTGGGCTTGCCGGACTGGCCGGAGTGGGCAGAGATGCGCAAGGCGGATGGCGGCTTTGCGCGGGCCTGCGAAGAGATGATCCAGAC > NC_002947/1768807‑1769102 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |