New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2365763 | 47 (0.960) | 4 (0.080) | 4/240 | NT | 7.8% | coding (156/906 nt) | lysR | transcriptional regulator LysR |
? | NC_002947 | = 2365793 | 50 (1.060) | coding (186/906 nt) | lysR | transcriptional regulator LysR |
AACTGTCCGTCCGCCACATCGAAGTGTTCCGCGCCATCATGGCCGCTGGCAGTGTCACGGGGGCGGCGCGCCTGCTGTTCACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2365612‑2365763 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAGTCACCTGCTCCAGCCGCGCCAGTTCGCGGCTGACGGTCGGCTGCGAGGTGAACAGCAGGCGCGCCGCCCCCGTGACACTGCCAGCGGCCATGATG < NC_002947/2365793‑2365646 AACTGTCCGTCCGCCACATCGAAGTGTTCCGCGCCATCATGGCCGCTGGCAGTGTCACGGGGGCGGCGCGCCTGCTGTTCACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGC > 1:899027/1‑150 GTCCGTCCGCCACATCGAAGTGTTCCGCGCCATCATGGCCGCTGGCAGTGTCACGGGGGCGGCGCGCCTGCTGTTCACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGaga < 1:1285734/150‑4 CACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAG > 1:104508/1‑126 CACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAG < 2:104508/126‑1 ACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGC > 1:575208/1‑60 ACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGC < 2:575208/60‑1 TCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAA > 1:217308/1‑95 TCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAA < 2:217308/95‑1 GCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAGTCACCTGCTCCAGCCGCGCCAGTTCGCGGCTGACGGTCGGCTGCGAGGTGAACAGCAGGCGCGCCGCCCCCGTGACACTGCCAGCGGCCATGATG < 1:736741/150‑1 GCCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAGTCACCTGCTCCAGCCGCGCCAGTTCGCGGCTGACGGTAGGCTGCGAGGTGAACAGCAGGCGCGCCGCCCCCGGGACACTGCCAGCGGCCATGATG < 2:1167355/150‑1 AACTGTCCGTCCGCCACATCGAAGTGTTCCGCGCCATCATGGCCGCTGGCAGTGTCACGGGGGCGGCGCGCCTGCTGTTCACCTCGCAGCCGACCGTCAGCCGCGAACTGGCGCGGCTGGAGCAGGTGACTGGCCTGAACCTGTTCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2365612‑2365763 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcCTGGGCCGTCGCCACCAGGCGCCCGCCCTCGCGCTCGAACAGGTTCAGGCCAGTCACCTGCTCCAGCCGCGCCAGTTCGCGGCTGACGGTCGGCTGCGAGGTGAACAGCAGGCGCGCCGCCCCCGTGACACTGCCAGCGGCCATGATG < NC_002947/2365793‑2365646 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |