New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2661073 =	44 (0.900)	3 (0.060)	3/244	NT	6.4%	intergenic (‑153/‑154)	PP_2332/PP_2333	hypothetical protein/GntR family transcriptional regulator
	?	NC_002947	2661095 =	45 (0.940)					intergenic (‑175/‑132)	PP_2332/PP_2333	hypothetical protein/GntR family transcriptional regulator

AACTAGCGAAACAAGACCTGCAAGTCAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCTGGCGTCAAGACGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2661194‑2661073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGCGCGATCTGACAGCGTTGAAGTGGT  >  NC_002947/2661095‑2661122                                                                                                                                                        AACTAGCGAAACAAGACCTGCAAGACAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTTGAAGTGGT  <  2:1202624/150‑1                                      GAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTT          >  1:650723/1‑105                                      GAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCCGACGTCTTGACGCCAGCGGTGCGCGATCTGACAGCGTT          <  2:650723/105‑1                                                                                                                                                        AACTAGCGAAACAAGACCTGCAAGTCAAAGACAAAATGAACATTGTCGACAATCGTCTAATCGCGAACTATCACCACTTCAACGCTGTCAGATCGCGCACCGCTGGCGTCAAGACGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2661194‑2661073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGTGCGCGATCTGACAGCGTTGAAGTGGT  >  NC_002947/2661095‑2661122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.