New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3070249 =	43 (0.880)	4 (0.090)	3/236	NT	10.1%	coding (1295/1521 nt)	aldB‑II	aldehyde dehydrogenase
	?	NC_002947	3070310 =	31 (0.670)					coding (1356/1521 nt)	aldB‑II	aldehyde dehydrogenase

CATCTTGTGGGTCTCACGGCCAACACCGGACTTCTTGTACCCCCCGAACGCCGCATGCGCCGGGTACAGGTGGTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3070403‑3070249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATC  >  NC_002947/3070310‑3070458                                                                                                                                                                                                                                                                                                                  CATCTTGTGGGTCTCACGGCCAAGTCCGGGCTTCGTGTGCCCCCCGAACGCCGCATGCGCCGGGTATAGGTGTTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAG                                                                                                                                                            <  1:222719/150‑1  ATCTTGTGGGTCTCACGGCCAACACCGGACTTCTTGTACCCCCCGAACGCCGCATGCGCCGGGTACAGGTGGTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGG                                                                                                                                                           >  1:1032321/1‑150                      AACACCGGACTTCTTGTACCCCCCGAACGCCGCATGCGCCGGGTACAGGTGGTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAG                                                                                                                                                            <  1:455617/129‑1                      AACACCGGACTTCTTGTACCCCCCGAACGCCGCATGCGCCGGGTACAGGTGGTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAG                                                                                                                                                            >  2:455617/1‑129                                                                                              CCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGG                                                                                                 >  1:367445/1‑116                                                                                              CCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGG                                                                                                 <  2:367445/116‑1                                                                                               CCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGcc                                                                   <  2:17676/145‑3                                                                                               CCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGAC                                                                   >  1:17676/1‑145                                                                                                                                                     AGGCCGGGCGAGTGGGGACCAACTGCGACCGCCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGGTCCTGCTGGTGAGCTACGACA        <  2:148782/150‑1                                                                                                                                                           GGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATC  <  1:242189/150‑1                                                                                                                                                                                                                                                                                                                  CATCTTGTGGGTCTCACGGCCAACACCGGACTTCTTGTACCCCCCGAACGCCGCATGCGCCGGGTACAGGTGGTAGCAGTTGGTCCACACTCGCCCGGCCTTGATCCCGCGGCCCATGCGGTAAGCGCGGTTGATGTCGCGGGTCCACAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3070403‑3070249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATC  >  NC_002947/3070310‑3070458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.