New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3070249 = | 43 (0.880) | 4 (0.090) | 3/236 | NT | 10.1% | coding (1295/1521 nt) | aldB‑II | aldehyde dehydrogenase |
? | NC_002947 | 3070310 = | 31 (0.670) | coding (1356/1521 nt) | aldB‑II | aldehyde dehydrogenase |
TTACTACATTCAGCCAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCA > NC_002947/3070100‑3070396 | gattgatgtcgtagctcaccagcaggttcttggtctgctgataatggtcaagcatcatcttgtgggtctcacggccaacaccggacttcttgtaccccccgaacgccgcatgcgccgggtacaggtggtagcagttggtccacactcgcc < 1:242189‑M1/1‑1 (MQ=255) tgtcgtagctcaccagcaggaccttggtctgctgataatggtcaagcatcatcttgtgggtctcacggccaacaccggacttcttgtaccccccgaacgccgcatgcgccgggtacaggcggtcgcagttggtccccactcgcCCGGCCt < 2:148782‑M1/7‑1 (MQ=255) aTTCAGCCAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGCCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCtg > 2:69657/1‑150 (MQ=255) ccAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGAcc > 1:331682/1‑150 (MQ=255) aaCCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCACGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGACGCCGGCCTGTGGACCcg > 2:1026388/1‑150 (MQ=255) aGGGCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAAcc < 1:699672/150‑1 (MQ=255) gggCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGCCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACcg < 1:69657/150‑1 (MQ=255) ggCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACcgc > 2:383458/1‑150 (MQ=255) aacaaGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTAc > 1:930546/1‑150 (MQ=255) caaGATGCGCGTGTTCCAGGAAGAAATCTTTGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCg > 2:321267/1‑150 (MQ=255) ggAAGAAATCGTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGCTCaa > 2:242189/1‑150 (MQ=255) gaagaaATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTa < 2:115312/128‑1 (MQ=255) gaagaaATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTa > 1:115312/1‑128 (MQ=255) agaaATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGAAACGGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGc > 1:85584/1‑150 (MQ=255) gaaATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCAGGGGCCGCGGGATCAAGGcc < 2:444715/150‑1 (MQ=255) aaaTCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCTGCCTGGGCGCCGGCCtgtg < 1:39749/100‑1 (MQ=255) aaaTCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGACCTGGGCGCCGGCCtgtg > 2:39749/1‑100 (MQ=255) tCGGGCGAGTGGGGGGCGTCACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAg < 2:331682/150‑1 (MQ=255) gtctcacggccaacaccggacttcttgtaccccccgaacgccgcatgcgccgggtacaggtggtagcagttggtccacactcgcCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCgg > 1:17676‑M1/85‑145 (MQ=255) ggctcacggccaacaccggacttcttgtaccccccgaacgccgcatgcgccgggtacaggtggtagcagttggtccacactcgcCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCgg < 2:17676‑M1/61‑1 (MQ=255) gCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCgg < 1:947989/129‑1 (MQ=255) gCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCgg > 2:947989/1‑129 (MQ=255) cggtggtgGGCGGGACCACCGTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGa < 2:165323/148‑1 (MQ=255) aGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGAc > 2:1032321/1‑150 (MQ=255) aGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGAc < 1:383458/150‑1 (MQ=255) aGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGAc > 1:1261865/1‑150 (MQ=255) tggtggGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCa > 2:732915/1‑150 (MQ=255) tggGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACt < 2:1115562/150‑1 (MQ=255) ggCGTGACCACCTTCAAGGACGAAGCCGTAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCAGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGc < 1:193787/150‑1 (MQ=255) ggCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGc < 2:474169/150‑1 (MQ=255) ccTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCt < 2:63940/141‑1 (MQ=255) ccTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCt > 1:63940/1‑141 (MQ=255) cccccgaacgccgcatgcgccgggtacaggtggtagcagttggtccacactcgcCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCggg > 1:367445‑M1/55‑116 (MQ=255) cccccgaacgccgcatgcgccgggtacaggtggtagcagttggtccacactcgcCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCggg < 2:367445‑M1/62‑1 (MQ=255) aGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCgcgc > 1:639645/1‑85 (MQ=255) aGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCgcgc < 2:639645/85‑1 (MQ=255) gaagccgaagcGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGa < 2:1099870/114‑1 (MQ=255) gaagccgaagcGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGa > 1:1099870/1‑114 (MQ=255) gccgaagcGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATgcg < 1:1237564/150‑1 (MQ=255) gaagcGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATgcggcg > 2:424474/1‑150 (MQ=255) gaagcGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATgcggcg > 2:561272/1‑150 (MQ=255) gcgcTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTc < 2:85584/150‑1 (MQ=255) tGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCgggg > 2:116826/1‑150 (MQ=255) cGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGACGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGt > 2:815221/1‑150 (MQ=255) gACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGc > 1:102246/1‑102 (MQ=255) gACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGc < 2:102246/102‑1 (MQ=255) gACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTcc > 2:175977/1‑150 (MQ=255) tGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCgggg > 2:267748/1‑131 (MQ=255) tGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCgggg < 1:267748/131‑1 (MQ=255) gggCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGAc > 1:780668/1‑150 (MQ=255) ggCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGAcc < 1:815221/150‑1 (MQ=255) cgcCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCca < 1:561272/150‑1 (MQ=255) | TTACTACATTCAGCCAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAGGAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGAATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAGTGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCA > NC_002947/3070100‑3070396 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |