| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4625972 = | NA (NA) | 2 (0.060) +CGACCGCTGTACTCCACCAACCCCATTGCATTTGCCGC |
4/174 | NT | 4.8% | intergenic (+4519/+45) | PP_5654/PP_4091 | phosphotriesterase/transposase |
| ? | NC_002947 | 5401729 = | 57 (1.160) | intergenic (+1057/+111) | PP_4743/PP_4745 | hypothetical protein/transposase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATACGTGGCTGCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4626120‑4625972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCAGTAAC‑CGCCCCGTGTCACTGGCGGCGGCAAATGCAATGGGGTTGGTGGAGTACAGCGGTCGGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG > NC_002947/5401729‑5401833 |||||||||||||||||||||||||||||||||||||| ATACGTGGCTGCGCCACGTCCTGGAGCGACTGCCGCCCGTTGCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACC < 1:336951/150‑1 ACGTGGCTGCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTCTTCGCCAGAGATGCCACGGTAACTTTGGCTGCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGA < 2:425132/150‑1 TGGCTGCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATTGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCG > 2:480697/1‑150 GCTGCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCT > 2:1253450/1‑150 GCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTA < 1:1253450/150‑1 CCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCAGGGATCGGTTACCGACCGCTGTACTC > 1:189781/1‑150 CGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCAC < 2:1139509/150‑1 CTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCACCAACCCCATTGCA < 2:982199/150‑1 CCGCACGCCTCATCGGTAGCACACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCGCCAACCCCATTGCATTT < 2:658815/150‑1 AGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCACCAACCCCATT < 1:431051/86‑1 AGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCACCAACCCCATT > 2:431051/1‑86 GTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCACCAACCCCATTGCATTTGCCGCCGCCAGTAAC‑CGCCCCGTGTCACTGG > 1:27630/1‑90 GTAGGTGGGGTTCATGGATCGGTTACCGACCGCTGTACTCCACCAACCCCATTGCATTTGCCGCCGCCAGTAAC‑CGCCCCGTGTCACTGG < 2:27630/90‑1 CCAACCCCATTGCATTTGCCGCCGCCAGTGACACGGGGCG‑GTTACTGGCGGCGGCAAATGCAATGGGGTTGGTGGAGTACAGCGGTCGGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG > 1:184965/1‑127 CCAACCCCATTGCATTTGCCGCCGCCAGTGACACGGGGCG‑GTTACTGGCGGCGGCAAATGCAATGGGGTTGGTGGAGTACAGCGGTCGGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG < 2:184965/127‑1 |||||||||||||||||||||||||||||||||||||| ATACGTGGCTGCGCCACGTCCTGGAGCGACTGCCGCACGCCTCATCGGTAGCAGACTACGAAGCGCTGCTGCCATGGAACTGTTCGCCAGAGATGCCACGGTAACTTTGGCTTCCACCTTGTGGTAGGTGGGGTTCATGGATCGGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4626120‑4625972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCAGTAAC‑CGCCCCGTGTCACTGGCGGCGGCAAATGCAATGGGGTTGGTGGAGTACAGCGGTCGGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG > NC_002947/5401729‑5401833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |