New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4876390 =	60 (1.220)	3 (0.070)	3/224	NT	5.3%	intergenic (+183/+254)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	4876494 =	54 (1.230)					intergenic (+287/+150)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase

CTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4876549‑4876390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGAC  >  NC_002947/4876494‑4876640                                                                                                                                                                                                                                                                                                                     CTCTTGGCGGGTGACCCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAAC                                                                                                                                                               <  2:71249/150‑1    TTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGAACTTGGGCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCG                                                                                                                                                            >  1:707535/1‑150        cgggttcACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCC                                                                                                                                                        <  1:1021966/143‑1        CGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCC                                                                                                                                                        <  2:1188357/150‑1         GGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGGGGCGGCAACGGTGAACGGCGGGGAGGGATTGGCCCGCCGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCT                                                                                                                                                       >  2:1269688/1‑150           GTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC                                                                                                                                                     <  1:920103/150‑1                                                                 GGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAG                                                                                               >  2:287808/1‑150                                                                   GTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGG                                                                                                             >  1:687403/1‑134                                                                   GTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGG                                                                                                             <  2:687403/134‑1                                                                                                                                                      CCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAATACGCACGTCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTT          <  2:887586/150‑1                                                                                                                                                      CCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTT          >  2:511605/1‑150                                                                                                                                                      CCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGAC                        >  1:521735/1‑136                                                                                                                                                      CCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGAC                        <  2:521735/136‑1                                                                                                                                                       CCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTC         >  2:958985/1‑150                                                                                                                                                              TACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGAC  <  1:1188357/150‑1                                                                                                                                                                                                                                                                                                                     CTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAATGCGGTGGTGGCGGCAACGGTGAACGGCGGGTAGGGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4876549‑4876390 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGAC  >  NC_002947/4876494‑4876640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.