New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3966277 | 43 (0.880) | 3 (0.070) | 3/234 | NT | 5.8% | coding (426/2001 nt) | ydcP | peptidase |
? | NC_002947 | = 3966297 | 58 (1.260) | coding (446/2001 nt) | ydcP | peptidase |
CTTGGGGTGATGGAGCTGGACATCCCGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAGCCTGCCGCCTGC > NC_002947/3966152‑3966446 | cTTGGGGTGATGGAGCTGGACATCCCGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCTGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATccgc < 1:215638‑M2/150‑5 (MQ=255) tGGACATCCCGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGaaa > 1:490431/1‑150 (MQ=255) ccGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATgcc < 1:853017/150‑1 (MQ=255) cGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATgccg > 1:873307/1‑150 (MQ=255) cGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATgccg > 1:148145/1‑150 (MQ=255) tCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCg > 2:1200206/1‑150 (MQ=255) aGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGt > 1:417551/1‑150 (MQ=255) tGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGACACCGATGCCGCCATCGAGttct > 1:215839/1‑150 (MQ=255) gCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCTGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATc < 2:215638/150‑1 (MQ=255) gCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACg > 1:577912/1‑150 (MQ=255) ccAGGCCGACATCCGCACCCTGGAACGGGCGGAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGCACCTGCCACAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCTATCGAGTTCTGCATCAACGgcgc > 2:38391/1‑150 (MQ=255) ccAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGgcgc > 1:1100838/1‑150 (MQ=255) cGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCtgtg > 2:930093/1‑150 (MQ=255) tCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTgg < 1:1200206/150‑1 (MQ=255) gCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGGACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGt > 1:673535/1‑150 (MQ=255) cACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGtt < 2:577912/150‑1 (MQ=255) aCCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTtc > 1:42787/1‑150 (MQ=255) cTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTctct < 1:785635/150‑1 (MQ=255) tGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTg < 2:148145/150‑1 (MQ=255) tGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTg < 2:58334/150‑1 (MQ=255) tGGAACGGGCCAAGTTCCTCGACCAGGCCGGGGTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTg > 1:722118/1‑150 (MQ=255) ggAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTgg < 2:417551/150‑1 (MQ=255) ggAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTgg < 2:873307/150‑1 (MQ=255) gAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGc < 1:930093/150‑1 (MQ=255) aaCGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGcc > 1:1010974/1‑150 (MQ=255) cGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCaa < 1:855524/150‑1 (MQ=255) ccAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCa > 2:395667/1‑150 (MQ=255) cAAGTTCCTCGACCAGGCCGGGTTCCCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGGGTGGCGTTCTCTGGCCACTGCaa < 1:38391/150‑1 (MQ=255) aaGTTCCTCGACCAGACCGGGTTCTCGCAACTGGTACTGACGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAAc > 2:147929/1‑150 (MQ=255) ttCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCAAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACAtt > 1:226927/1‑150 (MQ=255) tCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTccc > 2:539455/1‑150 (MQ=255) gACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCAt < 1:395667/150‑1 (MQ=255) cGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTg > 1:906852/1‑112 (MQ=255) cGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTg < 2:906852/112‑1 (MQ=255) gggTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATccgcgccagtaccagttgcgagaacccggcctggtcgaggaacttggcccgttccagggtgcggatgtcggtctgggtgctggcatgcagctcgattggcggg < 1:756919‑M2/150‑104 (MQ=255) tcGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTc > 2:54242/1‑131 (MQ=255) tcGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTc < 1:54242/131‑1 (MQ=255) aaCTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAgcg > 1:448558/1‑150 (MQ=255) gTACTGGCGCGGGAGCTGAACCTGAACGAATTCGGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAAc > 1:358438/1‑150 (MQ=255) cTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGa > 1:189091/1‑130 (MQ=255) cTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGa < 2:189091/130‑1 (MQ=255) tGGCGCGGGAGCTGAACCTGCAGCAAATccgcgccagtaccagttgcgagaacccggcctggt > 2:834597‑M2/1‑28 (MQ=255) tGGCGCGGGAGCTGAACCTGCAGCAAATccgcgccagtaccagttgcgagaacccggcctggt < 1:834597‑M2/63‑36 (MQ=255) tGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATGGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTTGCCAATGCAACATTTccc > 1:1041697/1‑120 (MQ=255) tGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTccc < 2:1041697/120‑1 (MQ=255) ggAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCAt > 1:630420/1‑115 (MQ=255) ggAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCAt < 2:630420/115‑1 (MQ=255) ggAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAgcgc < 1:589440/135‑1 (MQ=255) ggAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAgcgc > 2:589440/1‑135 (MQ=255) gCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGAt < 2:311657/145‑1 (MQ=255) gCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGAt > 1:311657/1‑145 (MQ=255) gCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTc < 2:448558/150‑1 (MQ=255) aaCCTGCCGCAAAGCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCaa < 2:190608/150‑1 (MQ=255) aaCCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCaa < 2:722118/150‑1 (MQ=255) aCCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAg > 1:1257120/1‑150 (MQ=255) ccTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgc > 2:170780/1‑150 (MQ=255) ccTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgc < 2:490431/150‑1 (MQ=255) cTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGAt > 2:988489/1‑36 (MQ=255) cTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGAt < 1:988489/36‑1 (MQ=255) cTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgcc > 1:194152/1‑150 (MQ=255) gcagcaAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgcctg > 1:1072940/1‑150 (MQ=255) cagcaAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgcctgc < 2:1257120/150‑1 (MQ=255) tCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTATTCTTTGCCATTGGTCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAgcctgccgcctgc < 2:358438/150‑1 (MQ=255) | CTTGGGGTGATGGAGCTGGACATCCCGCCAATCGAGCTGCATGCCAGCACCCAGACCGACATCCGCACCCTGGAACGGGCCAAGTTCCTCGACCAGGCCGGGTTCTCGCAACTGGTACTGGCGCGGGAGCTGAACCTGCAGCAAATCCGCGCCATCGCCGCCGAAACCGATGCCGCCATCGAGTTCTTCATCCACGGCGCGCTGTGCGTGGCGTTCTCTGGCCAATGCAACATTTCCCATGCGCAGACCGGCCGCAGCGCCAACCGTGGTGATTGCTCGCAAGCCTGCCGCCTGC > NC_002947/3966152‑3966446 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |