New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 560533759 (1.200)4 (0.080) 4/240 NT 5.9% coding (661/1419 nt) PP_4926 HlyD family secretion protein
?NC_002947 = 5605372 70 (1.490)coding (626/1419 nt) PP_4926 HlyD family secretion protein

GCTCCAGGCGGGCCTGCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAGGCAGGTGCCACAT  >  NC_002947/5605226‑5605519
                                                                                                                                                  |                                                                                                                                                   
gCTCCAGGCGGGCCTGCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcgg                                                                                                                                                  >  2:987323‑M2/1‑147 (MQ=255)
           gCCTGGTCCTTGGCCAGGTAGGTGTGCTTGGCCACGGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGa                                                                                                                                       <  2:504589/150‑1 (MQ=255)
             cTGCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGAcc                                                                                                                                     >  1:527117/1‑150 (MQ=255)
               gCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTc                                                                                                                                                    <  2:40571‑M2/133‑2 (MQ=255)
               gCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTc                                                                                                                                                    >  1:40571‑M2/1‑132 (MQ=255)
                 tCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGAtt                                                                                                                                 >  1:289182/1‑150 (MQ=255)
                  ccTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCATGGGCGGAACGGATTTCGGCAGCGCGTTGACCGAttt                                                                                                                                >  2:425939/1‑150 (MQ=255)
                   cTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGt                                                                                                                                          <  1:798015/139‑1 (MQ=255)
                   cTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGt                                                                                                                                          >  2:798015/1‑139 (MQ=255)
                    ttttCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCg                                                                                                                              <  2:1264941/150‑1 (MQ=255)
                         cAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCATTGACCGATTTCGGCATc                                                                                                                         >  2:168166/1‑150 (MQ=255)
                          aggtaggtGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGCAACGGATTTCGGCAGCGCGGTGACCGTTTGCGGCATCg                                                                                                                        <  2:755782/150‑1 (MQ=255)
                                gtgtGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGt                                                                                                                  >  1:1124360/1‑150 (MQ=255)
                                           cACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGc                                                                                                       >  2:117082/1‑150 (MQ=255)
                                           cACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGc                                                                                                       <  1:425939/150‑1 (MQ=255)
                                            aCCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGcc                                                                                                      >  2:698083/1‑150 (MQ=255)
                                             ccgcctCTTCCCTGAACAACAGCTTGTAAGCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGGCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCt                                                                                                     <  1:661429/150‑1 (MQ=255)
                                               ggtacgccACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGc                                                                                                   >  1:3315/8‑150 (MQ=255)
                                               gccgATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGc                                                                                                   >  1:145546/1‑150 (MQ=255)
                                                ccgATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGtt                                                                                                                                         <  1:677189/111‑1 (MQ=255)
                                                ccgATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGtt                                                                                                                                         >  2:677189/1‑111 (MQ=255)
                                                       aCTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCTGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCg                                                                                                                              >  2:697675/1‑115 (MQ=255)
                                                       aCTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCTGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCg                                                                                                                              <  1:697675/115‑1 (MQ=255)
                                                       aCTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAg                                                                                           <  2:91228/150‑1 (MQ=255)
                                                       aCTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTAAGCACCAGTAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAg                                                                                           >  2:369426/1‑150 (MQ=255)
                                                         tGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGt                                                                                         >  1:822908/1‑150 (MQ=255)
                                                         tGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGt                                                                                         >  1:74303/1‑150 (MQ=255)
                                                         ggAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGt                                                                                         >  2:342812/2‑150 (MQ=255)
                                                          gAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATAACGAACAGTGGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTa                                                                                        >  2:44577/1‑150 (MQ=255)
                                                           aacaacAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTAt                                                                                       >  2:506898/1‑150 (MQ=255)
                                                           aacaacAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTAt                                                                                       >  1:57320/1‑150 (MQ=255)
                                                           aacaacAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTAt                                                                                       >  2:848339/1‑150 (MQ=255)
                                                             caacaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTg                                                                                     >  1:376551/1‑150 (MQ=255)
                                                              aacaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGc                                                                                    >  1:612462/1‑150 (MQ=255)
                                                              aacaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCACCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGc                                                                                    <  2:1084973/150‑1 (MQ=255)
                                                              aacaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGACCCTGGGCGGAACGGATTTc                                                                                                                                                    >  2:327485‑M2/1‑85 (MQ=255)
                                                              aacaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGACCCTGGGCGGAACGGATTTc                                                                                                                                                    <  1:327485‑M2/86‑2 (MQ=255)
                                                               acaGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGcc                                                                                   <  1:641587/150‑1 (MQ=255)
                                                                 aGCGTGTAATCCGCCGTCAGTTGGCGCGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGCCAGCGCGTTGACCGATTTCGGCATCGGCCTGTACCAGCGTGGCCTGCAACTCCAGGTATTGcccc                                                                                 <  1:1014787/150‑1 (MQ=255)
                                                                 aGCGTGTAAGCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGACAGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGcccc                                                                                 <  1:1244295/150‑1 (MQ=255)
                                                                      gTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTccag                                                                            >  1:123930/1‑150 (MQ=255)
                                                                                    gTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTgcgcgc                                                              >  1:1158391/1‑150 (MQ=255)
                                                                                    gTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTgcgcgc                                                              <  2:612462/150‑1 (MQ=255)
                                                                                    gTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTgcgcgc                                                              >  2:350389/1‑150 (MQ=255)
                                                                                     ttGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCgcc                                                             >  1:330492/1‑150 (MQ=255)
                                                                                     ttGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCgcc                                                             <  2:123930/150‑1 (MQ=255)
                                                                                        gCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCgcctgc                                                          <  2:3315/150‑1 (MQ=255)
                                                                                          gggTGATCACCAACAGTTGCCGGAACGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCgcctgcct                                                        >  1:361574/1‑150 (MQ=255)
                                                                                            gTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCctgcctgc                                                      <  1:575046/150‑1 (MQ=255)
                                                                                                tCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTgcg                                                  >  1:1026486/1‑150 (MQ=255)
                                                                                                  aCCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGcgcg                                                >  1:1127314/1‑150 (MQ=255)
                                                                                                  aCCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGcgcg                                                >  2:898426/1‑150 (MQ=255)
                                                                                                    cAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcggcaactgttggtgatcacccgccaactgacggcggattacaagctgttgttcagtgaatcggcggtggccaagcacacctacctggaaaaggagcaggccc                                              <  1:46231‑M2/150‑104 (MQ=255)
                                                                                                     aaCAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGcc                                             <  1:506898/150‑1 (MQ=255)
                                                                                                      aCAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcggcaactgttggtgatcacccgccaactgacggcggattacaagctgttgttcagtgaatcggcggtggccaagcacacctac                                                                 <  2:544229‑M2/129‑85 (MQ=255)
                                                                                                      aCAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcggcaactgttggtgatcacccgccaactgacggcggattacaagctgttgttcagtgaatcggcggtggccaagcacacctac                                                                 >  1:544229‑M2/1‑45 (MQ=255)
                                                                                                        aGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTg                                          <  1:898426/150‑1 (MQ=255)
                                                                                                        aGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTAGTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTg                                          <  2:145546/150‑1 (MQ=255)
                                                                                                          ttGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGc                                        <  2:74303/150‑1 (MQ=255)
                                                                                                             ccGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTg                                     >  1:397605/1‑150 (MQ=255)
                                                                                                               ggAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcggca                                                                                                                                                <  2:523056‑M2/41‑6 (MQ=255)
                                                                                                               ggAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTcggca                                                                                                                                                >  1:523056‑M2/1‑36 (MQ=255)
                                                                                                                   cgcgTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTAt                               <  1:698083/150‑1 (MQ=255)
                                                                                                                      gTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCaa                            >  1:888515/1‑150 (MQ=255)
                                                                                                                       ggaGCCCGGCGCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAAt                           <  2:376551/148‑1 (MQ=255)
                                                                                                                       gcgctccGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAAt                           <  1:299103/145‑1 (MQ=255)
                                                                                                                        cAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATg                          <  2:1158391/150‑1 (MQ=255)
                                                                                                                        cAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATg                          <  1:522944/150‑1 (MQ=255)
                                                                                                                        cAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATg                          <  1:342812/150‑1 (MQ=255)
                                                                                                                         aGCCCGGCCCTGGGCGGAACGGATTTcggcaactgttggtgatcacccgccaactgacggcggattacaagctgttgttcagtgaatcggcggtggccaagcacacctacctggaaaaggagcaggcccgcctggagcaggagcgtgaac                         >  2:46231‑M2/1‑26 (MQ=255)
                                                                                                                         aGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATgg                         >  2:828139/1‑150 (MQ=255)
                                                                                                                         aGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATgg                         <  2:397605/150‑1 (MQ=255)
                                                                                                                              ggCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCa                    <  2:527117/150‑1 (MQ=255)
                                                                                                                              ggCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCa                    <  1:848339/150‑1 (MQ=255)
                                                                                                                               gCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAg                   <  2:1127314/150‑1 (MQ=255)
                                                                                                                                  cTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGa                >  2:340313/1‑150 (MQ=255)
                                                                                                                                  cTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGa                <  1:350389/150‑1 (MQ=255)
                                                                                                                                    gggCGGAACGGATTTCGGCAGCGCGTTGACTGATTTCGGCTTCTGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAgggtta              <  1:369426/150‑4 (MQ=255)
                                                                                                                                    gggCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAgg              <  1:340313/150‑1 (MQ=255)
                                                                                                                                     ggCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAGGc             <  2:888515/150‑1 (MQ=255)
                                                                                                                                             gtaTTTCTGCAGCCCTTTACCCCGTTTCTCCATCGTCCTTTTCCAGCGTCGGCTTCATCTCCATTTATTGTCCCTCCAGCCATCCCTTCGCGCCTGCCTGCTTCTCGGCCGTGGCCTGCTGTATCAATGGTGCCAGGGAGGCAGGTGCca     <  2:361574/148‑1 (MQ=255)
                                                                                                                                             ggATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAGGCAGGTGCca     <  2:1026486/150‑1 (MQ=255)
                                                                                                                                                tttCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAGGCAGGTGCCACAt  <  2:57320/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GCTCCAGGCGGGCCTGCTCCTTTTCCAGGTAGGTGTGCTTGGCCACCGCCGATTCACTGAACAACAGCTTGTAATCCGCCGTCAGTTGGCGGGTGATCACCAACAGTTGCCGGAGCGCGTCAGCCCGGCCCTGGGCGGAACGGATTTCGGCAGCGCGTTGACCGATTTCGGCATCGGCCTGTTCCAGCGTGGCCTGCAACTCCAGGTATTGCCCCTCCAGCCAGCGCTGCGCGCCTGCCTGCTGCGCGGCCGTGGCCTGCGGTATCAATGGTGCCAGGGAGGCAGGTGCCACAT  >  NC_002947/5605226‑5605519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.