New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874604 =	71 (1.450)	6 (0.130)	6/228	NT	8.1%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874686 =	71 (1.590)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase

GGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCAC  >  NC_002947/5874537‑5874834                                                                                                                                                       |                                                                                                                                                     gggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTTCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGaaa                                                                                                                                                      <  2:590975/150‑1 (MQ=255) gggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGaaa                                                                                                                                                      <  2:870575/150‑1 (MQ=255)          gCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTTAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCa                                                                                                                                             <  1:733146/150‑1 (MQ=255)              ggTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                                                                                                         >  2:306832/1‑150 (MQ=255)                tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                                                                                                         <  2:207534/148‑1 (MQ=255)                tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                                                                                                         >  1:207534/1‑148 (MQ=255)                tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTa                                                                                                                                       >  1:1028236/1‑150 (MQ=255)                  aGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                                                                                                     >  1:126398/1‑150 (MQ=255)                       ttCCATCTCGCCGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGc                                                                                                                                <  1:903713/150‑1 (MQ=255)                         ccATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCg                                                                                                                              >  2:296936/1‑150 (MQ=255)                           aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGcc                                                                                                                            >  2:863394/1‑149 (MQ=255)                              tctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGACCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                                                                                                         >  1:7353/1‑150 (MQ=255)                              tctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCATCTTCGCGGGATTACCGGCTCCAGCCAGGGTAGGTGAGTCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                                                                                                         >  2:1110772/1‑150 (MQ=38)                                  ggTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCa                                                                                                                     >  1:576450/1‑150 (MQ=255)                                  ggTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCa                                                                                                                     <  1:956267/150‑1 (MQ=255)                                   gtcgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGctcagctcag                                                                                                                    <  1:351599/150‑1 (MQ=255)                                   gtcgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGctcagctcag                                                                                                                    >  2:351599/1‑150 (MQ=255)                                     cgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                                                                                                     <  2:854535/131‑1 (MQ=255)                                     cgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGc                                                                                                                                     >  1:854535/1‑131 (MQ=255)                                       tcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAAc                                                                                                                <  1:1194019/150‑1 (MQ=255)                                         cTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                                                                                                              >  1:300026/1‑150 (MQ=255)                                         cTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                                                                                                              >  2:1161216/1‑150 (MQ=255)                                          ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGt                                                                                                             >  1:851590/1‑150 (MQ=255)                                             aaCTTGCATTTTCCGGTAGCTTCTTCGCGGGCTTCCCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTg                                                                                                          <  2:851590/150‑1 (MQ=255)                                              aCTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGt                                                                                                         <  2:693714/150‑1 (MQ=255)                                                tGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAg                                                                                                       >  1:1079359/1‑150 (MQ=255)                                                  gCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGc                                                                                                     >  2:58982/1‑150 (MQ=255)                                                     ttttGCGGTAGCTTCTTCGTGGGCTGACCTGCGCCGTATGATGTATCTCAGGCCTTGAGGCCTGAGCTAATATTTGT‑GGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCNCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg                                                                                                  <  1:863394/150‑1 (MQ=255)                                                     ttttGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg                                                                                                  <  2:126398/150‑1 (MQ=255)                                                            gTAGCTTCTTCCCGGGCTTTCCCGTTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCg                                                                                           <  1:602466/150‑1 (MQ=255)                                                             tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                                                                                                               >  2:884110/1‑97 (MQ=255)                                                             tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCAt                                                                                                                                               <  1:884110/97‑1 (MQ=255)                                                             tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCgg                                                                                          <  2:1028236/150‑1 (MQ=255)                                                                 ttcttcGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtctc                                                                                      >  1:1049217/1‑150 (MQ=255)                                                                     TCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTcc                                                                                  >  2:1079359‑M1/1‑150 (MQ=255)                                                                             taaCCCGCTCCGGCCAAGGTATCTCAGGCCTGGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACgg                                                                          >  2:982884/3‑150 (MQ=255)                                                                             cttgcccgctcccacaggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACg                                                                           >  2:850180‑M2/75‑150 (MQ=255)                                                                             TTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                                                                                                         >  2:1145797‑M1/1‑103 (MQ=255)                                                                             TTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAg                                                                                                                         <  1:1145797‑M1/103‑1 (MQ=255)                                                                             TTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACgg                                                                          >  2:1049217‑M1/1‑150 (MQ=255)                                                                             TTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACgg                                                                          <  1:254718‑M1/150‑1 (MQ=255)                                                                             TTAACCGCTCCTGCCAAGGTATCGCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACgg                                                                          <  2:982691‑M1/150‑1 (MQ=255)                                                                              ttgcccgctcccacaggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACgg                                                                          >  1:895825‑M2/74‑150 (MQ=255)                                                                                 cccgctcccacaggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTa                                                                                                                                  >  2:486817‑M2/71‑91 (MQ=255)                                                                                 cccgctcccacaggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTa                                                                                                                                  <  1:486817‑M2/21‑1 (MQ=255)                                                                                 ccGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGaa                                                                                                                 >  2:449940/1‑107 (MQ=255)                                                                                 ccGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGaa                                                                                                                 <  1:449940/107‑1 (MQ=255)                                                                                 ccGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTaa                                                                      >  2:149449/1‑150 (MQ=255)                                                                                       cccacaggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGAt                                                                 <  1:850180‑M2/86‑1 (MQ=255)                                                                                       cTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATc                                                                >  2:459572/1‑150 (MQ=255)                                                                                          ccAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCCGCCCTAGCTTAGCCGCTCAGCCCAGGCACAGTTCGTAGGCCGGGGCTTCGGTCTCGTCCCACTACGGGTAACCGATCTTg                                                             >  2:280325/1‑150 (MQ=39)                                                                                          ccAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             <  1:280325/150‑1 (MQ=255)                                                                                          ccAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             <  1:58982/150‑1 (MQ=255)                                                                                           cAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGCAGGCTTGTGTTTGGGTCTCGTCCCAGTACGGGTAACCGATCTTgg                                                            >  1:1049044/1‑150 (MQ=39)                                                                                            aggtactgcgcaggcctcaaggcctgagataccttggcaggagcgggtaagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTgg                                                            <  2:895825‑M2/91‑1 (MQ=255)                                                                                             aGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCt                                                               <  1:719356/145‑1 (MQ=255)                                                                                             aGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGcc                                                          >  1:110812/1‑150 (MQ=255)                                                                                             aGGTATCTCAGGCCTTGAGGCATGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCt                                                               >  2:719356/1‑145 (MQ=255)                                                                                              ggTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCa                                                         <  1:1161216/150‑1 (MQ=255)                                                                                               gTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg                                                                                                  <  2:571940/108‑1 (MQ=255)                                                                                               gTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg                                                                                                  >  1:571940/1‑108 (MQ=255)                                                                                                 tgcgcAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGt                                                                        <  2:156742/128‑1 (MQ=255)                                                                                                 tgcgcAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCAATCAGCCCTAGCTTACCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGt                                                                        >  1:156742/5‑132 (MQ=255)                                                                                                   ctcAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             <  1:228557/141‑1 (MQ=255)                                                                                                   ctcAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             >  2:228557/1‑141 (MQ=255)                                                                                                    tcAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTg                                                   >  2:1225338/1‑150 (MQ=255)                                                                                                     cAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGc                                                  <  1:296936/150‑1 (MQ=255)                                                                                                     cAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGc                                                  >  2:757263/1‑150 (MQ=255)                                                                                                       ggCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCg                                                >  2:557590/1‑150 (MQ=255)                                                                                                        gCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             >  2:332115/1‑136 (MQ=255)                                                                                                        gCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTg                                                             <  1:332115/136‑1 (MQ=255)                                                                                                          cTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCa                                             >  2:937945/1‑150 (MQ=255)                                                                                                             gAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCa                                          >  2:7459/1‑150 (MQ=255)                                                                                                                gCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGt                                       >  1:883274/1‑150 (MQ=255)                                                                                                                   tGCGC‑AGTACATCTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGAc                                    >  2:955315/1‑150 (MQ=255)                                                                                                                         aGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCg                               <  1:306832/150‑1 (MQ=255)                                                                                                                           tACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGta                             <  1:935208/150‑2 (MQ=255)                                                                                                                              cTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTcc                                                                                  >  2:1086119/1‑94 (MQ=255)                                                                                                                              cTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTcc                                                                                  <  1:1086119/94‑1 (MQ=255)                                                                                                                              cTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGtcctc                          <  2:110812/150‑1 (MQ=255)                                                                                                                              cTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGtcctc                          <  1:1225338/150‑1 (MQ=255)                                                                                                                               tgtgGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGtcctcc                         <  2:1141378/150‑1 (MQ=255)                                                                                                                               tgtgGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGtcctcc                         <  1:459572/150‑1 (MQ=255)                                                                                                                                   ggAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCa                     <  1:1110772/150‑1 (MQ=255)                                                                                                                                    gAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTATGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCAc                    >  1:433768/1‑150 (MQ=255)                                                                                                                                        gggCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGc                >  2:1147300/1‑150 (MQ=255)                                                                                                                                         ggCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCa               <  1:7459/150‑1 (MQ=255)                                                                                                                                            aagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGc                                                           >  2:264005‑M2/12‑103 (MQ=255)                                                                                                                                            aagcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGc                                                           <  1:264005‑M2/92‑1 (MQ=255)                                                                                                                                              gcccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGcccc          >  2:149429‑M2/10‑150 (MQ=255)                                                                                                                                              gCCCGCGAAAAGGCCATCAGCCGTAGCTTAGCCGCTCAGCCCCGGAACAGGGTGTGGGCCGGGTTTGCGGTCGCGTCCCAGTACGGGTAACCCACCTTGGCCCGCGCTTCCGGCTCCAAGTGCCGTTCGTCCACCGGCACCTGGAGcccc          >  2:78603/1‑150 (MQ=255)                                                                                                                                               cccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGt                                                                                                             >  2:1193313‑M2/9‑50 (MQ=255)                                                                                                                                               cccgcgaaAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGt                                                                                                             <  1:1193313‑M2/42‑1 (MQ=255)                                                                                                                                                      aAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTATGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCcaccac  <  2:433768‑M2/149‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                     GGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGC‑AGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTCGTCCCAGTACGGGTAACCGATCTTGGCCAGCGCTGCCGGCACCAGGTGACGTTCGTCCTCCGGCACCTGCAGCCCCGCCACCAC  >  NC_002947/5874537‑5874834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.