New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 601932659 (1.200)5 (0.120) 4/204 NT 8.5% intergenic (‑71/+74) dadX/dadA‑II alanine racemase/D‑amino acid:quinone oxidoreductase
?NC_002947 = 6019356 59 (1.470)intergenic (‑101/+44) dadX/dadA‑II alanine racemase/D‑amino acid:quinone oxidoreductase

TTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGC  >  NC_002947/6019209‑6019503
                                                                                                                                                   |                                                                                                                                                   
ttGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcc                                                                                                                                                   <  1:541278‑M2/150‑3 (MQ=255)
 tgtgGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGAGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcct                                                                                                                                                  >  2:1076839‑M2/1‑147 (MQ=255)
   tgGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgt                                                                                                                                                >  2:1269201‑M2/1‑145 (MQ=255)
   tgGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgt                                                                                                                                                >  2:541278‑M2/1‑145 (MQ=255)
    ggCGCAGGGCCTGGGTGTGGATGAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGTGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtg                                                                                                                                               >  2:163008‑M2/1‑144 (MQ=255)
       gcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggg                                                                                                                                            <  1:211497‑M2/150‑10 (MQ=255)
           ggCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                        >  2:931254‑M2/1‑137 (MQ=255)
           ggCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTAGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                        >  2:400887‑M2/1‑137 (MQ=255)
            gCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcggg                                                                                                                                       >  2:384050‑M2/1‑136 (MQ=255)
               tGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                    >  1:396119‑M2/1‑133 (MQ=255)
                 gAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagc                                                                                                                                  >  2:962218‑M2/1‑131 (MQ=255)
                     tCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgc                                                                                                                              <  1:929796‑M2/150‑24 (MQ=255)
                       gATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgt                                                                                                                                                >  1:824960‑M2/1‑125 (MQ=255)
                       gATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgt                                                                                                                                                <  2:824960‑M2/130‑6 (MQ=255)
                        aTCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCAGAGCATTCAAAAGCGGTGGTGTTACTGTGGGAGCGGGCAAGCCCGCaaa                                                                                                                           >  1:143930/1‑150 (MQ=255)
                        aTCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGGGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTTGGAGCGGGCAGGCCCGCaaa                                                                                                                           >  2:165337/1‑150 (MQ=255)
                           aGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATgg                                                                                                                        >  2:498343/1‑150 (MQ=255)
                                  gggcgggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAAGTGGTGCACAGGTTTCAAAAGCGGTGGTGTTCCTGTGGGAGGGGGCCAGACCGCAAATGGGCCGGca                                                                                                                 >  1:138383/1‑150 (MQ=39)
                                         aCGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTg                                                                                                          <  2:22751/150‑1 (MQ=255)
                                         aCGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATAGATGGTGGATTATTAGCGGGCTTGCCCGCTCCCACAGGGCGTGCACAGCTTTCAAAAGCGGCGCTATTCCTGTGGGAACAGGCAAGCAACCAAATGGGCCGACACAGGCTg                                                                                                          >  2:45123/1‑150 (MQ=255)
                                          cGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGt                                                                                                         <  1:558466/150‑1 (MQ=255)
                                             aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTAc                                                                                                      >  2:1116168/1‑150 (MQ=255)
                                              tAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACCGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTAct                                                                                                     >  2:1008342/1‑150 (MQ=255)
                                                gCGGCTGCCTTAGGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTActgc                                                                                                   <  1:128785/150‑1 (MQ=255)
                                                  ggCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCACGCCCGCAAATGGGCCGGCACAGGCTGTTActgctg                                                                                                 <  2:118091/150‑1 (MQ=255)
                                                   gCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTgg                                                                                                <  1:1156048/150‑1 (MQ=255)
                                                   gCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTgg                                                                                                <  1:968633/150‑1 (MQ=255)
                                                    cTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGATGAAAATGTTGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGt                                                                                               >  1:719695/1‑150 (MQ=255)
                                                    cTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTCCACAGCTTTCAAAAGCGGTGGTGTTCTTGTGGGGGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGt                                                                                               <  2:652102/150‑1 (MQ=255)
                                                        cTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGt                                                                                               <  2:857246/146‑1 (MQ=255)
                                                        cTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGt                                                                                               >  1:857246/1‑146 (MQ=255)
                                                         ttATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGcc                                                                                          >  1:135552/1‑150 (MQ=255)
                                                         ttATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGACGTGCACAGCTTTCAAAAGCGGTGGTGTTTCTGTGGGAGCGGGCAAGCCCGCAAATTGGCCGGCAACAGCTGTTACTGCTGGTGAGcc                                                                                          >  2:302867/1‑150 (MQ=38)
                                                            tggtggTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgc                                                                                       <  1:551668/150‑1 (MQ=255)
                                                             ggtggtTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcg                                                                                      >  1:256575/1‑150 (MQ=255)
                                                                ggtTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcgcgc                                                                                   <  2:135552/150‑1 (MQ=255)
                                                                          gAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTg                                                                         <  1:45441/150‑1 (MQ=255)
                                                                             aTCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCtt                                                                      >  2:631637/1‑150 (MQ=255)
                                                                             aTCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGGGGTGTTCCTGTGGGAGCGGGCAAGCCCGACAATGGGCCGGCCCGGAGAGTTATTGCGGAATATCCGAGGCGCTTTGCCCGTGCtt                                                                      >  2:336243/1‑150 (MQ=25)
                                                                                ggtggtGGATTATTCGCGGGCATACCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGc                                                                   >  2:215792/1‑150 (MQ=255)
                                                                                 gtggtgGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                          <  1:95765/142‑1 (MQ=255)
                                                                                 gtggtgGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                          >  2:95765/1‑142 (MQ=255)
                                                                                  tggtggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGGGTTCCAGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAAGTAGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCGTGGCCa                                                                 >  1:73374/1‑150 (MQ=39)
                                                                                    gtggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACt                                                               >  2:1189349/1‑150 (MQ=255)
                                                                                     tggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACtt                                                              >  2:497625/1‑150 (MQ=255)
                                                                                     tggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACtt                                                              >  1:593667/1‑150 (MQ=255)
                                                                                        attattCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTccc                                                           <  1:244194/150‑1 (MQ=255)
                                                                                               gcgGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTAtt                                                    >  2:962359/1‑150 (MQ=255)
                                                                                               gcgGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTAtt                                                    <  1:631637/150‑1 (MQ=255)
                                                                                                 gggCTTGCCCGCTCACACAGGTCGTGCGCAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCACGTGCTTGGCCACTTCCCGGCTATTGc                                                  <  2:719695/150‑1 (MQ=38)
                                                                                                  ggCTTGCCCGCTCCTACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCATGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCGTTGCCCGTGCTTGGCCACTTCCCGGCTATTGcc                                                 <  1:302867/150‑1 (MQ=255)
                                                                                                     ttGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATa                                              >  1:1159151/1‑150 (MQ=255)
                                                                                                        cccGCTCCCACAGGTCGTGCACAGTTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACg                                           <  1:165337/150‑1 (MQ=255)
                                                                                                        cccGCTCCAACAGGGCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGAAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATCACg                                           <  1:568410/150‑1 (MQ=255)
                                                                                                         ccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccaggcc                                          <  1:243383‑M2/150‑108 (MQ=255)
                                                                                                         ccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgc                                                                   >  2:39464‑M2/1‑43 (MQ=255)
                                                                                                         ccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgc                                                                   <  1:39464‑M2/125‑83 (MQ=255)
                                                                                                         ccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACgg                                          >  1:818522/1‑150 (MQ=255)
                                                                                                           gCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGga                                        >  2:409594/1‑150 (MQ=255)
                                                                                                            cTCCCACAGGTCGTGCACAGCTTTGAAAAGCGGTGGTGTTCCTGTGGGAGAGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgag                                       <  2:73374/150‑1 (MQ=255)
                                                                                                             tCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga                                      <  1:1008342/150‑1 (MQ=255)
                                                                                                              cccACAGGTCGGGCACAGCTTTCAAAAGCGGTGGTGTTCCTGGGGGAGCGGGCATGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGat                                     <  2:65093/150‑1 (MQ=255)
                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgat                                                       <  1:1256771‑M2/131‑95 (MQ=255)
                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgat                                                       >  2:1256771‑M2/1‑37 (MQ=255)
                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTa                                                                                                       >  2:1148638/1‑83 (MQ=255)
                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTa                                                                                                       <  1:1148638/83‑1 (MQ=255)
                                                                                                                 acaGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCACGAAAATGGGCCGGCACAGGCTGTTAGTGCTGGTGAGCCGGCGCGATTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgagtgatg                                  >  1:10803/1‑145 (MQ=255)
                                                                                                                   aGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtg                                                                                                                                               <  2:106630‑M2/39‑7 (MQ=255)
                                                                                                                   aGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtg                                                                                                                                               >  1:106630‑M2/1‑33 (MQ=255)
                                                                                                                    ggTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAg                               <  1:215792/150‑1 (MQ=255)
                                                                                                                     gTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAAt                                                                                                                          >  2:477155/1‑58 (MQ=255)
                                                                                                                     gTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAAt                                                                                                                          <  1:477155/58‑1 (MQ=255)
                                                                                                                            acaGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCgg                       <  1:962359/150‑1 (MQ=255)
                                                                                                                               gCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCgg                       <  2:1130967/147‑1 (MQ=255)
                                                                                                                               gCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCgg                       >  1:1130967/1‑147 (MQ=255)
                                                                                                                                 tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                          >  2:620953/1‑94 (MQ=255)
                                                                                                                                 tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                          <  1:620953/94‑1 (MQ=255)
                                                                                                                                 tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTg                  >  2:931889/1‑150 (MQ=255)
                                                                                                                                  ttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCgg                                                         >  2:1153876/1‑110 (MQ=255)
                                                                                                                                  ttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCgg                                                         <  1:1153876/110‑1 (MQ=255)
                                                                                                                                       aaGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGTGAGATATCCAGGCCTTCGGCACTGATCTGc            <  2:256575/150‑1 (MQ=255)
                                                                                                                                       aaGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGc            <  2:929796/150‑1 (MQ=255)
                                                                                                                                          cGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGc         >  2:1089677/1‑150 (MQ=255)
                                                                                                                                            gtggtgTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGctt       <  1:336243/150‑1 (MQ=255)
                                                                                                                                                 gtTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTgc  <  1:409594/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTTGC  >  NC_002947/6019209‑6019503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.