| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5538592 = | 49 (0.430) | 4 (0.040) | 4/202 | NT | 11.5% | intergenic (+34/+87) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| ? | NC_002947 | 5538647 = | 21 (0.220) | intergenic (+89/+32) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein | |||||
AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538761‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTTC > NC_002947/5538647‑5538795 AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTG < 1:1265197/150‑1 GCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGG < 1:641292/150‑1 AGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGA < 1:1970099/150‑1 cCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAAAAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGC < 1:1432407/149‑1 GCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCGGCCTGTCATTCCGCGTTAACTGATCGACTATTGGTTCTGCTTTGCACCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGC < 2:1013635/150‑1 TGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGACGCTCTCCCATTGCCTTTGTGGGAGCGG > 1:1515342/1‑150 GCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGagatcgg > 2:131872/1‑143 AAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTT < 2:266376/150‑1 GGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGT < 1:465492/150‑1 GCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCG < 2:2871849/138‑1 GCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCG > 1:2871849/1‑138 AAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA > 1:2736574/1‑150 AAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGC > 1:17101/1‑147 AAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGC < 2:17101/147‑1 GGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCC > 1:2951344/1‑125 GGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCC < 2:2951344/125‑1 GGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGC > 2:2003868/1‑121 GGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGC < 1:2003868/121‑1 GGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGT > 2:2815231/1‑119 GGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGT < 1:2815231/119‑1 GCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCC > 2:1098311/1‑114 GCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCC < 1:1098311/114‑1 AACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTT > 2:1043726/1‑114 AACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTT < 1:1043726/114‑1 TGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTC < 1:1948009/99‑1 TGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTC > 2:1948009/1‑99 TGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGG > 1:1840888/1‑73 TGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGG < 2:1840888/73‑1 AAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGA < 1:137967/88‑1 AAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGA > 2:137967/1‑88 CTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCA > 1:400811/1‑70 CTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCA < 2:400811/70‑1 CGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTT > 1:2966632/1‑84 CGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTT < 2:2966632/84‑1 GCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGG > 1:1197831/1‑150 CTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATG < 2:3054460/57‑1 CTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATG > 1:3054460/1‑57 gTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCT > 1:886588/2‑150 TTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCT > 1:2389517/1‑150 TTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCCGGATGAGAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCT > 2:2281561/1‑150 TGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTT < 2:2664335/76‑1 TGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTT > 1:2664335/1‑76 GTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGC > 2:170555/1‑150 TCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCC > 2:2150781/1‑150 TCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTG > 2:1276789/1‑147 TCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTG < 1:1276789/147‑1 GATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTT > 2:2859230/1‑150 GATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTT < 2:713494/142‑1 GATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAAGGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTT > 1:713494/1‑142 ATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTTC < 1:1707272/150‑1 AGCAGGCTGCCAAGGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538761‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCCTTTTC > NC_002947/5538647‑5538795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |