New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5538592 =49 (0.430)4 (0.040) 4/202 NT 11.5% intergenic (+34/+87) PP_4871/PP_4872 lysine decarboxylase family protein/hypothetical protein
?NC_002947 5538647 = 21 (0.220)intergenic (+89/+32) PP_4871/PP_4872 lysine decarboxylase family protein/hypothetical protein

GCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTT  >  NC_002947/5538443‑5538741
                                                                                                                                                     |                                                                                                                                                     
gcCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCttt                                                                                                                                                       <  1:1318308/150‑1 (MQ=255)
gaaaaggccaaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccat                                                                                                                                                       <  1:1707272‑M1/1‑1 (MQ=255)
 aaaaggccaaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTc                                                                                                                                                      >  2:2859230‑M1/149‑150 (MQ=255)
   cGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTctc                                                                                                                                                    <  2:40345/150‑3 (MQ=255)
     ggccaaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGa                                                                                                                                                  >  2:2150781‑M1/145‑150 (MQ=255)
      gccaaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGac                                                                                                                                                 >  2:170555‑M1/144‑150 (MQ=255)
        caaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGa                                                                                                                                                  <  1:1276789‑M1/6‑1 (MQ=255)
        caaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGa                                                                                                                                                  >  2:1276789‑M1/142‑147 (MQ=255)
         aaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtccttccgcgttaactgatcgactattggggctgctttgcagcccaTc                                                                                                                                                      >  1:713494‑M1/141‑142 (MQ=255)
         aaggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTc                                                                                                                                                      <  2:713494‑M1/2‑1 (MQ=255)
          aggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGacacac                                                                                                                                             >  1:886588‑M1/140‑149 (MQ=255)
          aggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACaa                                                                                                                                             >  1:2389517‑M1/140‑150 (MQ=255)
          aggccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctctcatccggcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACaa                                                                                                                                             >  2:2281561‑M1/140‑150 (MQ=255)
             ggCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGc                                                                                                                                          <  2:1498113/150‑1 (MQ=255)
             ccgaggcgtttgcgcgtaaccagcaggctgccaaggagcgcaaagaggcgagcaagggtggcaagggcaacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAGGc                                                                                                                                          >  1:1197831‑M1/137‑150 (MQ=255)
              gCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGcc                                                                                                                                         >  1:763340/1‑150 (MQ=255)
                    ttGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGGCTAAGTGGGCCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTTGCGACACAAGGCCGCtgac                                                                                                                                   >  2:1515342/1‑147 (MQ=255)
                        tgctgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaa                                                                                                                               >  2:1328636/1‑150 (MQ=255)
                         gctgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaaa                                                                                                                              <  1:1328636/150‑1 (MQ=255)
                         gctgGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaaa                                                                                                                              <  2:2275217/150‑1 (MQ=255)
                            ggggCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGc                                                                                                                           <  2:2128055/150‑1 (MQ=255)
                                cagcagCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGTGACTTTTGACAGCGGTTCTCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATg                                                                                                                       <  1:58547/150‑1 (MQ=255)
                                     gcCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa                                                                                                                  >  2:445263/1‑150 (MQ=255)
                                      ccGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAg                                                                                                                 <  1:1080484/150‑1 (MQ=255)
                                        ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGa                                                                                                                                                  <  1:1840870/115‑1 (MQ=255)
                                        ggACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGa                                                                                                                                                  >  2:1840870/1‑115 (MQ=255)
                                             aGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGCTACCACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          <  1:2490822/150‑1 (MQ=255)
                                              gctgctGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAgg                                                                                                                            <  1:2894520/131‑1 (MQ=255)
                                              gctgctGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAgg                                                                                                                            >  2:2894520/1‑131 (MQ=255)
                                                  ctgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCATTGTGTc                                                                                                     <  1:445263/150‑1 (MQ=255)
                                                   tgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGGGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          <  2:311931/144‑1 (MQ=255)
                                                   tgGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          >  1:311931/1‑144 (MQ=255)
                                                      aaGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGa                                                                                                 >  1:1691946/1‑150 (MQ=255)
                                                              gACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa                                                                                                                  >  2:3060034/1‑125 (MQ=255)
                                                              gACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa                                                                                                                  <  1:3060034/125‑1 (MQ=255)
                                                              gACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCgg                                                                                                              >  1:1377665/1‑129 (MQ=255)
                                                              gACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCgg                                                                                                              <  2:1377665/129‑1 (MQ=255)
                                                                 aGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaaa                                                                                                                              <  1:1567788/110‑1 (MQ=255)
                                                                 aGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACaaa                                                                                                                              >  2:1567788/1‑110 (MQ=255)
                                                                                gTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTc                                                                       <  2:1691946/150‑1 (MQ=255)
                                                                                 aacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGaca                                                                                                                                                <  2:2664335‑M1/8‑1 (MQ=255)
                                                                                 aacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGaca                                                                                                                                                >  1:2664335‑M1/69‑76 (MQ=255)
                                                                                 aacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCg                                                                                                                                        <  2:2966632‑M1/16‑1 (MQ=255)
                                                                                 aacaagaagccgcgtcagcctgtcattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCg                                                                                                                                        >  1:2966632‑M1/69‑84 (MQ=255)
                                                                                   gcgcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCaa                                                                            >  2:1310520/1‑142 (MQ=255)
                                                                                   gcgcCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCaa                                                                            <  1:1310520/142‑1 (MQ=255)
                                                                                      ccTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgg                                                                                                                      >  2:2312179/1‑97 (MQ=255)
                                                                                      ccTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATgg                                                                                                                      <  1:2312179/97‑1 (MQ=255)
                                                                                        tAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          >  2:1222738/1‑107 (MQ=255)
                                                                                        tAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          <  1:1222738/107‑1 (MQ=255)
                                                                                           gTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAc                                                            <  1:2756322/150‑1 (MQ=255)
                                                                                            tGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAAcg                                                           <  2:451445/150‑1 (MQ=255)
                                                                                              ggTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgt                                                                                                        <  1:1646394/103‑1 (MQ=255)
                                                                                              ggTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTtgt                                                                                                        >  2:1646394/1‑103 (MQ=255)
                                                                                                       gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGc                                                                                                                                          <  2:1495938/60‑1 (MQ=255)
                                                                                                       gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGc                                                                                                                                          >  1:1495938/1‑60 (MQ=255)
                                                                                                       gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAg                                                                                                                             <  1:1150386/73‑1 (MQ=255)
                                                                                                       gcagcCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAg                                                                                                                             >  2:1150386/1‑73 (MQ=255)
                                                                                                        cattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAg                                                                                                                                            >  1:3054460‑M1/46‑57 (MQ=255)
                                                                                                        cattccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAg                                                                                                                                            <  2:3054460‑M1/12‑1 (MQ=255)
                                                                                                           tccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          <  1:137967‑M1/46‑1 (MQ=255)
                                                                                                           tccgcgttaactgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          >  2:137967‑M1/43‑88 (MQ=255)
                                                                                                                      tgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAg                                                                                                                 >  1:400811‑M1/32‑70 (MQ=255)
                                                                                                                      tgatcgactattggggctgctttgcagcccaTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAg                                                                                                                 <  2:400811‑M1/39‑1 (MQ=255)
                                                                                                                        gagaCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa                                                                                                                  <  2:1824144/67‑1 (MQ=255)
                                                                                                                        gagaCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGa                                                                                                                  >  1:1824144/1‑67 (MQ=255)
                                                                                                                           aCTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGAGGCGTCgtgttg                            >  1:1667993/1‑150 (MQ=255)
                                                                                                                                    aCCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          <  1:62932/63‑1 (MQ=255)
                                                                                                                                    aCCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCtt                                                                                                          >  2:62932/1‑63 (MQ=255)
                                                                                                                                        cTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTc                                                                                                     >  1:620094/1‑64 (MQ=255)
                                                                                                                                        cTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTc                                                                                                     <  2:620094/64‑1 (MQ=255)
                                                                                                                                         ttCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGctt                                   <  2:1187954/129‑1 (MQ=255)
                                                                                                                                         ttCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGctt                                   >  1:1187954/1‑129 (MQ=255)
                                                                                                                                                  cTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGAGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCctc     >  1:1468399/1‑150 (MQ=255)
                                                                                                                                                     TCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCttt  >  1:2736574‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCCCGCAACACCGGGCGATGTTGCTGCTGGGGCAGCAGCCGGACGAGCTGCTGGAAGGGATGGACAGCTTTGTGGCGCCGGTCGCGCCTAAGTGGGTCGACAAGCAGCCTGACTGAAGCTGAGACTTTTGGGACCGCTTCGCGGTCCTTTCGCGACACAAGGCCGCTCCCACAAAGGCAATGGGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTT  >  NC_002947/5538443‑5538741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.