| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5695264 = | 107 (0.930) | 12 (0.110) | 12/230 | NT | 11.3% | coding (933/1005 nt) | pyrB | aspartate carbamoyltransferase |
| ? | NC_002947 | 5695289 = | 87 (0.810) | coding (958/1005 nt) | pyrB | aspartate carbamoyltransferase | |||||
GCCGCCGTCCAGGTGCAGGTCGGTGACCTGGTCCAGGCCACTGTTGGGGTCGATCACCCGGGCGCCAAGAATACTGATGGTCACTGGGCATTCTCCTGGTCCAATTGACGTTGCGCGTTCTGCCCGCTCATGGCCATGGACAGCACGGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5695416‑5695264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTGGACCAGGTCACCGACCT > NC_002947/5695289‑5695400 GCCGCCGTCCAGGTGCAGGTCGGTGACCTGGTCCAGGCCACTGTTGGGGTCGATCACCCGGGCGCCAAGAATACTGATGGTCACTGGGCATTCTCCTGGTCCAATTGACGTTGCGCGTTCTGCCCGCTCATGGCCATGGACAGCACGGCC > 2:308633/1‑150 CGCCGTCCAGGTGCAGGTCGGTGACCTGGTCCAGGCCACTGTTGGGGTCGATCACCCGGGCGCCAAGAATACTGATGGTCACTGGGCATTCTCCTGGTCCAATTGACGTTGCGCGTTCTGCCCGCTCATGGCCATGGACAGCACGGCCAT < 1:1790919/150‑1 TGCCCGCTCATGGCCATGGACAGCACGGCCATGCGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTG > 1:2999557/1‑128 TGCCCGCTCATGGCCATGGACAGCACGGCCATGCGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTG < 2:2999557/128‑1 CGCTCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGG > 1:439904/1‑93 CGCTCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGG < 2:439904/93‑1 GCTCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTT > 1:1377515/1‑90 GCTCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTT < 2:1377515/90‑1 TCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGG > 1:1864341/1‑97 TCATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGG < 2:1864341/97‑1 CATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTC > 1:1827435/1‑85 CATGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTC < 2:1827435/85‑1 TGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTGGACCAGGTCACCGACCT < 1:1278190/135‑1 TGGCCATGGACAGCACGGCCATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTGGACCAGGTCACCGACCT > 2:1278190/1‑135 CATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTC < 1:1777009/64‑1 CATGAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTC > 2:1777009/1‑64 GCCGCCGTCCAGGTGCAGGTCGGTGACCTGGTCCAGGCCACTGTTGGGGTCGATCACCCGGGCGCCAAGAATACTGATGGTCACTGGGCATTCTCCTGGTCCAATTGACGTTGCGCGTTCTGCCCGCTCATGGCCATGGACAGCACGGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5695416‑5695264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatgAGCGGGCAGAACGCGCAACGTCAATTGGACCAGGAGAATGCCCAGTGACCATCAGTATTCTTGGCGCCCGGGTGATCGACCCCAACAGTGGCCTGGACCAGGTCACCGACCT > NC_002947/5695289‑5695400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |