New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 594786 =122 (1.070)8 (0.080) 6/214 NT 7.3% intergenic (‑22/+105) PP_0505/PP_0506 hypothetical protein/ABC transporter permease
?NC_002947 594847 = 95 (0.950)intergenic (‑83/+44) PP_0505/PP_0506 hypothetical protein/ABC transporter permease

Only 100 of 150 total aligned reads displayed.

CTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGT  >  NC_002947/594702‑594995
                                                                                                                                                 |                                                                                                                                                    
  tGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCcg                                                                                                                                                <  2:2177853/150‑1 (MQ=255)
      ttCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGGTCCCACAGGTACTGCGCAAGATCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCAGGCGag                                                                                                                                            >  1:3056883/1‑149 (MQ=39)
         gctggctgacggcctgtccatacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcacgcccgctcccacagggagccccgcacgccataaccgatgtgcagtagctgtgggagcggtcGTGCCCGCGaagag                                                                                                                                         >  2:1110856‑M2/137‑148 (MQ=255)
               ccATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGt                                                                                                                                   <  1:366203/150‑1 (MQ=255)
                 aTAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTgg                                                                                                                                 >  2:2346129/1‑149 (MQ=255)
                 aTAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGa                                                                                                                                 <  2:1581599/150‑1 (MQ=255)
                  tAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAg                                                                                                                                <  2:2606907/150‑1 (MQ=255)
                  tAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAg                                                                                                                                <  1:1191603/150‑1 (MQ=255)
                  tAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAg                                                                                                                                <  1:1248587/150‑1 (MQ=255)
                       gCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                                                                                           >  1:230463/1‑150 (MQ=255)
                       gCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                                                                                           <  1:1155336/150‑1 (MQ=255)
                       gCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                                                                                           >  1:238414/1‑150 (MQ=255)
                       gCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                                                                                           >  2:2603045/1‑150 (MQ=255)
                       gCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGtt                                                                                                                           <  2:54113/150‑1 (MQ=255)
                          tCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGa                                                                                                                        <  1:1655929/150‑1 (MQ=255)
                           catacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcatGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            >  1:1536702‑M1/58‑129 (MQ=255)
                           catacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcatGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            >  1:1536113‑M1/58‑129 (MQ=255)
                           catacacctctgagtgcgcgtaatgatcaaacacctcaccgcctgcttcgcgggcatGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                            <  2:1536702‑M1/72‑1 (MQ=255)
                               aCCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCAtt                                                                                                                   <  1:247962/150‑1 (MQ=255)
                                ccAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTa                                                                                                                  <  1:1863876/150‑1 (MQ=255)
                                  agcaacagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTAcg                                                                                                                >  2:2402719/1‑150 (MQ=255)
                                   gcaacagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGAGATGCCCGCTCCCACAAGTACTGCACAAGCTCCAAAGCCTGCAGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTAcgc                                                                                                               >  1:1477069/1‑150 (MQ=255)
                                     aacagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACgcgc                                                                                                             <  1:705961/150‑1 (MQ=255)
                                      acagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGTTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGATGTTTGa                                                                                                                        >  2:2025441/1‑138 (MQ=255)
                                       cagcaaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCAc                                                                                                           >  2:1299859/1‑150 (MQ=255)
                                          caaGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCa                                                                                                        >  2:1655467/1‑150 (MQ=255)
                                             ggCCAGCAGCATGTGCATTGCCTGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCagag                                                                                                     <  2:238414/150‑1 (MQ=255)
                                             ggCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCGCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCagag                                                                                                     <  2:94599/150‑1 (MQ=255)
                                               ccAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAggg                                                                                                   >  2:1223685/1‑149 (MQ=255)
                                                   cagcaTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCa                                                                                                        <  2:1730288/141‑1 (MQ=255)
                                                   cagcaTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCa                                                                                                        >  1:1730288/1‑141 (MQ=255)
                                                    agcaTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCGCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATg                                                                                              <  2:724141/150‑1 (MQ=255)
                                                      caTGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGa                                                                                            >  2:3010488/1‑150 (MQ=255)
                                                         gtgCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTTCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAg                                                                                         <  1:1299859/150‑1 (MQ=255)
                                                         gtgCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGTTGTATGGACAg                                                                                         >  2:2027376/1‑150 (MQ=255)
                                                           gCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGc                                                                                       <  2:2330349/150‑1 (MQ=255)
                                                            cATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGcc                                                                                      <  2:230463/150‑1 (MQ=255)
                                                                      ctcttcgcgggcacGACCGCTCCCACAGCTACTGCACATCGGTTATGGCGTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTcagccagc                                                                            >  2:1110856‑M1/15‑150 (MQ=255)
                                                                      ctctTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTcagccagc                                                                            <  1:1960810/150‑1 (MQ=255)
                                                                       tctTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCg                                                                           >  1:784279/1‑150 (MQ=255)
                                                                         ttcgcgggcacgcccgctcccacagggagccccgcaggctttggagcttgtgcagtacctgtgggagcgggcATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATg                                                                                              <  2:1536113‑M2/57‑1 (MQ=255)
                                                                         ttcgcgggcacgcccgctcccacagggagccccgcaggctttggagcttgtgcagtacctgtgggagcgggcATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATg                                                                                              >  1:1536702‑M2/73‑129 (MQ=255)
                                                                           agcgGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTg                                                                       >  2:3060040/2‑150 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCg                                                                    <  1:1119272/150‑1 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTAcgc                                                                                                               >  2:2644512/1‑107 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTAcgc                                                                                                               <  1:2644512/107‑1 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCg                                                                    <  1:3060040/150‑1 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCg                                                                    <  1:2120974/150‑1 (MQ=255)
                                                                              gggCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCAGCGGGGCTCCCTGTGGGAGCGGGCTTGCCCGCGAAGGAGGCGCTGAGGTGTTTGATCATTACGCGCACTCCGAGGGGTATGGACAGACGGTCAGCCAGCGCTTGCCg                                                                    >  2:1020619/1‑150 (MQ=38)
                                                                                     CCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGcc                                                             <  2:1732791‑M1/150‑1 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTg                                                                                                                                  <  2:88003‑M1/80‑1 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGcc                                                                                      >  1:341883‑M1/1‑124 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGcc                                                                                      <  2:341883‑M1/124‑1 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTcag                                                                                 >  1:2423274‑M1/1‑129 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGc                                                                      <  1:926727‑M1/140‑1 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGc                                                                      >  2:926727‑M1/1‑140 (MQ=255)
                                                                                      CCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGccc                                                            <  1:2086906‑M1/150‑1 (MQ=255)
                                                                                       CGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCg                                                           <  2:1906023‑M1/150‑1 (MQ=255)
                                                                                        GCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCagag                                                                                                     >  2:681123‑M1/1‑107 (MQ=255)
                                                                                            ccacagggagccccgcaggctttggagcttgtgcagtacctgtgggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGa                                                                                                                        <  1:1945628‑M2/31‑1 (MQ=255)
                                                                                            CCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGa                                                                                            <  2:1154165‑M1/112‑1 (MQ=255)
                                                                                             cacagggagccccgcaggctttggagcttgtgcagtacctgtgggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGc                                                     >  2:50310‑M2/53‑150 (MQ=255)
                                                                                                   tACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCAc                                               >  2:1010744/1‑150 (MQ=255)
                                                                                                    aCTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCGTTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACg                                              >  2:2194343/1‑150 (MQ=255)
                                                                                                        cacaAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAg                                                                                         >  2:2353450/1‑103 (MQ=255)
                                                                                                        cacaAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGc                                          >  1:920807/1‑150 (MQ=255)
                                                                                                           aaGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAgg                                                                                        <  2:1169760/101‑1 (MQ=255)
                                                                                                           aaGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAgg                                                                                        >  1:1169760/1‑101 (MQ=255)
                                                                                                           aaGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCa                                       >  2:1736850/1‑150 (MQ=255)
                                                                                                           aaGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCa                                       >  1:2077938/1‑150 (MQ=255)
                                                                                                           aaGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGGGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCa                                       >  2:1752279/1‑150 (MQ=255)
                                                                                                            ggcgcccaaGCCTGCGGGGCCCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCNTCAGCCAGCNATTGCCGGNAAGCCCGCCACGCCGGCACGCTGCCCAt                                      <  1:1020619/143‑1 (MQ=255)
                                                                                                             gCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCAc                                                                                                           <  2:689350/80‑1 (MQ=255)
                                                                                                             gCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCAc                                                                                                           >  1:689350/1‑80 (MQ=255)
                                                                                                             gCTCCAAAGCCTGCGGCGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATc                                     <  1:2741826/150‑1 (MQ=255)
                                                                                                                ccAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCgg                                                  <  2:308241/134‑1 (MQ=255)
                                                                                                                ccAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCgg                                                  >  1:308241/1‑134 (MQ=255)
                                                                                                                 cAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTg                                                                                                                                  <  1:188021/53‑1 (MQ=255)
                                                                                                                 cAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTg                                                                                                                                  >  2:188021/1‑53 (MQ=255)
                                                                                                                  aaaGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCa                                    <  2:796300/146‑1 (MQ=255)
                                                                                                                  aaaGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCa                                    >  1:796300/1‑146 (MQ=255)
                                                                                                                  aaaGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCaa                                >  1:546329/1‑150 (MQ=255)
                                                                                                                        tGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCTGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTg                                           <  1:1050667/133‑1 (MQ=255)
                                                                                                                           ggggCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGcccc                       >  1:2428817/1‑150 (MQ=255)
                                                                                                                           ggggCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGcccc                       >  2:734121/1‑150 (MQ=255)
                                                                                                                            gggCTCCCTGTGGGAGCGGGCGTGCCCGCGACGCAGGCGGGGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGccccc                      <  1:2635202/150‑1 (MQ=255)
                                                                                                                            gggCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGgtgt                                                                                                 >  1:1128162/1‑75 (MQ=255)
                                                                                                                                tCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGga                  <  1:2370388/150‑1 (MQ=255)
                                                                                                                                tCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGga                  >  1:605696/1‑150 (MQ=255)
                                                                                                                                 cccTGTGGGAGGAGGCGTCCCCGCGAAGCAGGCGGTGAGTTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGgat                 <  2:3056883/150‑1 (MQ=255)
                                                                                                                                 cccTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATg                                                                                              >  1:285778/1‑73 (MQ=255)
                                                                                                                                  cctgtgggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGgatg                >  2:332494‑M2/16‑150 (MQ=255)
                                                                                                                                      tgggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAg                    >  2:2705072‑M2/12‑142 (MQ=255)
                                                                                                                                      tgggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAg                    <  1:2705072‑M2/131‑1 (MQ=255)
                                                                                                                                       gggagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTAATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGc           <  2:2466061‑M2/140‑1 (MQ=255)
                                                                                                                                         gagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGgtgt                                                                                                 <  1:2544335‑M2/54‑1 (MQ=255)
                                                                                                                                         gagcgggcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGgtgt                                                                                                 >  2:2544335‑M2/9‑62 (MQ=255)
                                                                                                                                               gcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCgg                                                  >  1:2107980‑M2/3‑103 (MQ=255)
                                                                                                                                               gcGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAgg   >  1:1216686‑M2/3‑150 (MQ=255)
                                                                                                                                                cGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGt  <  1:2346129‑M2/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CTTGGGTTCGGCGGCCCATAGAGGCATCGCTACCAGCAACAGCAAGGCCAGCAGCATGTGCATTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTACTGCACAAGCTCCAAAGCCTGCGGGGCTCCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGT  >  NC_002947/594702‑594995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.