New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3974772 =76 (0.660)5 (0.050) 4/234 NT 5.9% intergenic (‑256/‑85) PP_3503/PP_3504 sigma‑54 dependent transcriptional regulator/hypothetical protein
?NC_002947 3974818 = 87 (0.790)intergenic (‑302/‑39) PP_3503/PP_3504 sigma‑54 dependent transcriptional regulator/hypothetical protein

Only 100 of 101 total aligned reads displayed.

CATGGCGGCGCAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGTGAACTGAGCC  >  NC_002947/3974677‑3974965
                                                                                                                                             |                                                                                                                                                    
caTGGCGGCGCAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGactt                                                                                                                                                   >  1:1841799/1‑145 (MQ=255)
caTGGCGGCGCAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGactt                                                                                                                                                   <  2:1841799/145‑1 (MQ=255)
 aTGGCGGCGCAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGacttcacttc                                                                                                                                             >  1:410069/1‑150 (MQ=255)
          cAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTgg                                                                                                                                    <  1:1937389/150‑1 (MQ=255)
             gCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGAc                                                                                                                                 >  2:1010241/1‑150 (MQ=255)
              cAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGAcc                                                                                                                                >  1:202239/1‑150 (MQ=255)
              cAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGAcc                                                                                                                                <  2:2061212/150‑1 (MQ=255)
               aaGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCa                                                                                                                               >  2:486143/1‑150 (MQ=255)
               aaGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCa                                                                                                                               >  1:3040275/1‑150 (MQ=255)
                  aaCAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑ag                                                                                                                           <  1:1705145/150‑1 (MQ=255)
                   aCAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑aga                                                                                                                          <  2:480534/150‑1 (MQ=255)
                     atcGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑agaga                                                                                                                        <  2:2309044/148‑1 (MQ=255)
                            aCCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGaa                                                                                                                 >  1:2043608/1‑150 (MQ=255)
                            aCCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCCGGTGTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGaa                                                                                                                 <  1:2521739/150‑1 (MQ=255)
                                         tttACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGAc                                                                                                                     >  1:225554/1‑133 (MQ=255)
                                         tttACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGAc                                                                                                                     <  2:225554/133‑1 (MQ=255)
                                          ttACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTgg                                                                                                                                    <  2:1358047/118‑1 (MQ=255)
                                          ttACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTgg                                                                                                                                    >  1:1358047/1‑118 (MQ=255)
                                              aGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTcc                                                                                               >  2:133952/1‑150 (MQ=255)
                                              aGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTcc                                                                                               <  2:2300282/150‑1 (MQ=255)
                                                ccAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGa                                                                                                                                           <  2:2049400/105‑1 (MQ=255)
                                                ccAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGa                                                                                                                                           >  1:2049400/1‑105 (MQ=255)
                                                ccAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCgt                                                                                             >  1:239809/1‑150 (MQ=255)
                                                ccAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCgt                                                                                             >  1:1714751/1‑150 (MQ=255)
                                                      tgtgACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAAc                                                                                       >  2:1308241/1‑150 (MQ=255)
                                                            ttACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTAACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCa                                                                                 >  2:2715432/1‑150 (MQ=255)
                                                               cccACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCActg                                                                              >  1:1347672/1‑150 (MQ=255)
                                                                ccACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTg                                                                                                                                     >  1:1864441/1‑95 (MQ=255)
                                                                ccACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTg                                                                                                                                     <  2:1864441/95‑1 (MQ=255)
                                                                 cACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTggg                                                                                                                                   <  1:1583286/96‑1 (MQ=255)
                                                                 cACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTggg                                                                                                                                   >  2:1583286/1‑96 (MQ=255)
                                                                 cACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGAc                                                                                                                     <  2:2932990/109‑1 (MQ=255)
                                                                 cACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGAc                                                                                                                     >  1:2932990/1‑109 (MQ=255)
                                                                  aCGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTcc                                                                                               >  1:1555059/1‑130 (MQ=255)
                                                                  aCGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTcc                                                                                               <  2:1555059/130‑1 (MQ=255)
                                                                  aCGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCActgc                                                                             <  2:2303199/148‑1 (MQ=255)
                                                                  aCGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCActgc                                                                             >  1:2303199/1‑148 (MQ=255)
                                                                      acaacGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTg                                                                       >  2:2363910/1‑150 (MQ=255)
                                                                      acaacGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTg                                                                       <  2:239809/150‑1 (MQ=255)
                                                                       caacGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGc                                                                      <  1:486143/150‑1 (MQ=255)
                                                                         acGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCg                                                                    >  2:1360151/1‑150 (MQ=255)
                                                                          cGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTg                                                                                                                                     <  2:791172/85‑1 (MQ=255)
                                                                          cGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTg                                                                                                                                     >  1:791172/1‑85 (MQ=255)
                                                                               accAGTAGACATAACCTCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGCGACCGAACCATGAATGCCCCGCTCCGTGGCAACGAAGCACTACTCATTGCCGCCCACg                                                              >  2:359108/3‑150 (MQ=255)
                                                                               aTCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACg                                                              >  1:2312889/1‑150 (MQ=255)
                                                                                   gTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCtt                                                          >  1:1074407/1‑150 (MQ=255)
                                                                                   gTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCAACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGATCAT‑AGAGCGACTCAAACAATAGTCCCCCGCTCGTTGTCAACGAAGCACTGCTGATTGCCGACCACGCCtt                                                          <  1:2363910/150‑1 (MQ=255)
                                                                                    tAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGAGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAANGCCNCGCTNCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTc                                                         <  1:2631092/150‑1 (MQ=255)
                                                                                      gACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGa                                                       >  2:2598496/1‑150 (MQ=255)
                                                                                         aTAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGCAGCAACGCGGACATAACTTCAATGCTTGAGCAGATCCGAG‑GAAAGCACGAACAAAGCGCCGCGCCCTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAAcc                                                    >  2:2648850/1‑150 (MQ=255)
                                                                                         aTAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCAt                                                                                                             >  1:2274456/1‑93 (MQ=255)
                                                                                         aTAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCAt                                                                                                             <  2:2274456/93‑1 (MQ=255)
                                                                                         aTAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAAcc                                                    >  1:1677531/1‑150 (MQ=255)
                                                                                           aaCCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCtt                                                  >  1:815796/1‑150 (MQ=255)
                                                                                           aaCCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCtt                                                  >  2:1140327/1‑150 (MQ=255)
                                                                                            aCCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCttt                                                 >  1:123469/1‑150 (MQ=255)
                                                                                             ccccGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGAc                                                                  >  1:113492/1‑132 (MQ=255)
                                                                                             ccccGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGAc                                                                  <  2:113492/132‑1 (MQ=255)
                                                                                              cccGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGAc                                                                  >  2:1092141/1‑131 (MQ=255)
                                                                                              cccGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGAc                                                                  <  1:1092141/131‑1 (MQ=255)
                                                                                              cccGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTcc                                               >  2:952996/1‑150 (MQ=255)
                                                                                                cgcgttgcttcaaagtcgcctcattgatcgcgaagtgcagcgcggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAg                                             >  2:2143619‑M2/46‑150 (MQ=255)
                                                                                                cgcgttgcttcaaagtcgcctcattgatcgcgaagtgcagcgcggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAg                                             >  1:2893046‑M2/46‑150 (MQ=255)
                                                                                                 GCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGt                                            >  1:133952‑M1/1‑150 (MQ=255)
                                                                                                       cttcaaagtcgcctcattgatcgcgaagtgcagcgcggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGaa                                                                                    <  2:162561‑M2/66‑1 (MQ=255)
                                                                                                       cttcaaagtcgcctcattgatcgcgaagtgcagcgcggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGaa                                                                                    >  1:162561‑M2/39‑104 (MQ=255)
                                                                                                            cgcgATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTgg                                 <  2:202239/150‑1 (MQ=255)
                                                                                                            cgcgATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTgg                                 <  1:2715432/150‑1 (MQ=255)
                                                                                                            cgcgATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTgg                                 <  1:1489118/150‑1 (MQ=255)
                                                                                                            cgcgATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTgg                                 <  2:3040275/150‑1 (MQ=255)
                                                                                                             gcgATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTggg                                <  2:1347672/150‑1 (MQ=255)
                                                                                                              cgATCAATGCGCCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCTT‑AACATGCACCCGGGATGAATGCCCCGCTCCGTGGCAACGAAGCACTGCTGATTGCCGACCACGCGTTCGAACCTTTCCAGTGCGTAGCCTGGGa                               <  1:996276/150‑1 (MQ=255)
                                                                                                               gATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGAt                              <  2:2443663/150‑1 (MQ=255)
                                                                                                                aTCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATg                             >  2:2052894/1‑150 (MQ=255)
                                                                                                                aTCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATg                             <  1:1140327/150‑1 (MQ=255)
                                                                                                                 tCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAAc                                                     >  1:1709597/1‑125 (MQ=255)
                                                                                                                 tCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAAc                                                     <  2:1709597/125‑1 (MQ=255)
                                                                                                                    aTGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCAcc                         >  1:549578/1‑150 (MQ=255)
                                                                                                                       aGGCGACTTTGAAGCAACGCGAACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCTGCTCTGTGTGGGCGCGGCGTAGCGGAATACGCACCACGCTATCGAACCTTTCCAGTGCGTAGCCACGGATACACCCaa                      >  1:360653/1‑150 (MQ=255)
                                                                                                                        ggCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGGGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGTGAAGGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAAc                     >  1:2335454/1‑150 (MQ=255)
                                                                                                                        ggCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGTACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAAc                     >  2:958006/1‑150 (MQ=255)
                                                                                                                         gCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTgg                                                                                                                                    >  2:492413/1‑39 (MQ=255)
                                                                                                                         gCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTgg                                                                                                                                    <  1:492413/39‑1 (MQ=255)
                                                                                                                          cGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACgg                   <  1:1308241/150‑1 (MQ=255)
                                                                                                                           gACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGt                  >  2:2025766/1‑150 (MQ=255)
                                                                                                                            aCTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTa                 <  1:952996/150‑1 (MQ=255)
                                                                                                                             cTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTAc                <  1:2627394/150‑1 (MQ=255)
                                                                                                                              tttGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCActgc                                                                             <  1:280390/88‑1 (MQ=255)
                                                                                                                              tttGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCActgc                                                                             >  2:280390/1‑88 (MQ=255)
                                                                                                                              tttGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCAcc                         <  1:733397/140‑1 (MQ=255)
                                                                                                                              tttGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCAcc                         >  2:733397/1‑140 (MQ=255)
                                                                                                                               gaagtgcagcgcggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTg              <  1:2143619‑M2/136‑1 (MQ=255)
                                                                                                                                tGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTgg             >  2:1397371/1‑150 (MQ=255)
                                                                                                                                 gAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGt            <  2:549578/150‑1 (MQ=255)
                                                                                                                                    gCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCa                           >  2:1314085/1‑132 (MQ=255)
                                                                                                                                    gCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCa                           <  1:1314085/132‑1 (MQ=255)
                                                                                                                                     cAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCGAACGGTACTGGTGAAc        >  1:828591/1‑150 (MQ=255)
                                                                                                                                     cAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGTGAAc        >  1:2566110/1‑150 (MQ=255)
                                                                                                                                          cggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGTGAACTGAGc   <  1:1397371‑M2/147‑1 (MQ=255)
                                                                                                                                           ggACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGTGAACTGAGcc  <  2:123469‑M2/148‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
CATGGCGGCGCAGGCAAGAACAGCGTCGACCCTGAAAAAAATTTACAGCCAATGTGTGACTTACCCACGAACAACGAGCATCAGTAGACATAACCCCGCGCTGCACTTCGCGATCAATGAGGCGACTTTGAAGCAACGCGGACTTCACTTCGATGTTTGGGACCAT‑AGAGAGACCGAACCATGAATGCCCCGCTCCGTGTCAACGAAGCACTGCTGATTGCCGACCACGCCTTCGAACCTTTCCAGTGCGTAGCCTGGGATGCACCCAACGGTACTGGTGAACTGAGCC  >  NC_002947/3974677‑3974965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.