New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5897799 =	11 (0.650)	4 (0.290)	4/224	1.4	35.0%	intergenic (‑143/+91)	PP_5172/PP_5173	hypothetical protein/RND family transporter
	?	NC_002947	5897875 =	6 (0.440)					intergenic (‑219/+15)	PP_5172/PP_5173	hypothetical protein/RND family transporter

CCTTGCTGACGCTGCTGTTCCTGCCGGCGCTGTACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5897966‑5897799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtaaacccgctcctaccagGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCCAGAACACCTC  >  NC_002947/5897875‑5898021                                                                                                                                                                                                                                                                                                                             CCTTGCTGACGCTGCTCTTCCTGCCGGCCCTGTACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGG                                                                                                                                                                       <  1:66941/150‑1     cctaACGCTGCTGTTCCTGCCGGCGCTGCACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCAGCGACCACCGTATTCGCGGGTAAA                                                                                                                                                                   <  2:228642/146‑1           GCTGCTGTTCCTGCCGGCGCTGTACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCc                                                                                                                                                             >  2:366095/1‑149            CTGCTGTTCCTGCCGGCGCTGTACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTC                                                                                                                                                            >  1:259332/1‑150            CTGCTGTTCCTGCCGGCGCTGTACGTGGCCTGGTACAAGACCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTC                                                                                                                                                            <  2:259332/150‑1                                          TGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGG                                                                                                                                                                        >  1:187766/1‑108                                          TGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGG                                                                                                                                                                        <  2:187766/108‑1                                                                                                                CCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGG                                                                                                                                          >  1:411625/1‑68                                                                                                                CCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGG                                                                                                                                          <  2:411625/68‑1                                                                                                                 CGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGC                                                                                                                                >  1:381816/1‑77                                                                                                                 CGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAGGGGCCATATGGGCCTTCAGGC                                                                                                                                <  2:381816/77‑1                                                                                                                                                            CCGCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCC            >  2:287929/1‑150                                                                                                                                                              GCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCCAG          >  1:223962/1‑150                                                                                                                                                              GCTCCTACCAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCCAG          >  2:363440/1‑150                                                                                                                                                                      CAGGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCCAGAACACCTC  >  1:57658/1‑150                                                                                                                                                                                                                                                                                                                             CCTTGCTGACGCTGCTGTTCCTGCCGGCGCTGTACGTGGCCTGGTACAAGATCCGCGAGCCGCAGAAACACGCCTGAAGGCCCATATGGCCCCTGGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5897966‑5897799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtaaacccgctcctaccagGGGCCATATGGGCCTTCAGGCGTGTTTCTGCGGCTCGCGGATCTTGTACCAGGCCACGTACAGCGCCGGCAGGAACAGCAGCGTCAGCAAGGTCGCCACGATGATCCCGCCAATCATGGCGTAGGCCATGGGGCCCCAGAACACCTC  >  NC_002947/5897875‑5898021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.