New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6032797 =	11 (0.650)	4 (0.240)	4/270	1.7	23.8%	intergenic (+5/+131)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032901 =	15 (0.910)					intergenic (+109/+27)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein

CAGACACTGATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTA  >  NC_002947/6032652‑6032869                                                                                                                                                  |                                                                         tttgacgctgtcgttgaagcgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcaGTAcc                                                                      <  1:321384‑M1/5‑1 (MQ=255)      acTGATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCct                                                                 >  2:362053/1‑150 (MQ=255)         gATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCtt                                                              <  2:194958/150‑1 (MQ=255)          aTCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTc                                                             <  1:238238/150‑1 (MQ=255)                                     cTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                       <  1:348659/145‑1 (MQ=255)                                     cTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                       >  2:348659/1‑145 (MQ=255)                                             cccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGc                          <  1:62506/150‑1 (MQ=255)                                                     cggcgACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGt                  <  1:362053/150‑1 (MQ=255)                                                        cgACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGa               <  1:38286/150‑1 (MQ=255)                                                              atcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcaGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc         >  2:321384‑M1/85‑150 (MQ=255)                                                                     ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa  <  2:115547/150‑1 (MQ=255)                                                                                                            ttgtggtctgagggagtactgagagccttatagggtcaGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt   >  1:6919‑M1/39‑110 (MQ=255)                                                                                                            ttgtggtctgagggagtactgagagccttatagggtcaGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt   <  2:6919‑M1/72‑1 (MQ=255)                                                                                                                                  gtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCt           >  1:374258/1‑80 (MQ=255)                                                                                                                                  gtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCt           <  2:374258/80‑1 (MQ=255)                                                                                                                                                  |                                                                         CAGACACTGATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTA  >  NC_002947/6032652‑6032869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.