New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1037774 =	9 (0.530)	4 (0.280)	3/232	1.7	37.2%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	6 (0.420)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase

GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTC  >  NC_002947/1037629‑1037900                                                                                                                                                  |                                                                                                                               ttcgaagtcaaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTcg                                                                                                                            <  2:360923‑M1/5‑1 (MQ=255)  tcgaagtcaaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTcgc                                                                                                                           >  1:64636‑M1/145‑150 (MQ=255)   agcTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTcgcg                                                                                                                          <  1:121316/150‑1 (MQ=255)    gcTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTCATGACTGTGGCGGCCTCTTCGCgg                                                                                                                         <  1:382005/150‑1 (MQ=255)                         gTGGCTCGTGTCTCAGCTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCg                                                                                                    <  2:320316/150‑1 (MQ=255)                            gCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGGGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCCAGCCCGCTCCCAAATGCGTAg                                                                                                 >  2:197632/1‑150 (MQ=255)                             cTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGc                                                                                                <  2:308195/150‑1 (MQ=255)                                                      ggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTgg                                                                       >  2:383165‑M1/93‑150 (MQ=255)                                                      ggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTgg                                                                       >  2:383179‑M1/93‑150 (MQ=255)                                                                                                cgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg                                                                 >  1:220058‑M1/51‑114 (MQ=255)                                                                                                cgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg                                                                 <  2:220058‑M1/64‑1 (MQ=255)                                                                                                           gAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCATACCGGCTTCCCAGCCCTGTCCGAAATACGTAGCACTCTGTCTCGCGCTGTACGTGTGGGAGCGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcactt                  <  1:197632/150‑1 (MQ=255)                                                                                                                    gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCa         >  2:9263/1‑150 (MQ=255)                                                                                                                      gagagGCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGTTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCAGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAgg       <  1:206897/150‑1 (MQ=255)                                                                                                                           tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAACCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTc  >  1:360923/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                               GCAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTC  >  NC_002947/1037629‑1037900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.