New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1037774 =	9 (0.530)	4 (0.280)	3/232	1.7	37.2%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	6 (0.420)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase

GAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAA  >  NC_002947/1037735‑1037996                                                                                                                      |                                                                                                                                                 gAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCATACCGGCTTCCCAGCCCTGTCCGAAATACGTAGCACTCTGTCTCGCGCTGTACGTGTGGGAGCGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcactt                                                                                                                  <  1:197632/150‑1 (MQ=255)          gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCa                                                                                                         >  2:9263/1‑150 (MQ=255)            gagagGCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGTTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCAGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAgg                                                                                                       <  1:206897/150‑1 (MQ=255)                 tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAACCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTc                                                                                                  >  1:360923/1‑150 (MQ=255)                                                      ccgctcccacacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCg                                                                                                 >  1:220058‑M2/65‑114 (MQ=255)                                                      ccgctcccacacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCg                                                                                                 <  2:220058‑M2/50‑1 (MQ=255)                                                            ccacacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTAcc                                                       >  2:383165‑M2/59‑150 (MQ=255)                                                            ccacacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTAcc                                                       >  2:383179‑M2/59‑150 (MQ=255)                                                                          ttCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCt                                         <  2:162163/150‑1 (MQ=255)                                                                                         tACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGt                          >  1:216022/1‑150 (MQ=255)                                                                                                                gcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGa   >  1:64636‑M2/7‑150 (MQ=255)                                                                                                                 cgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGaa  <  2:360923‑M2/145‑1 (MQ=255)                                                                                                                      |                                                                                                                                                 GAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAA  >  NC_002947/1037735‑1037996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.