New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 15797 = | 47 (0.790) | 4 (0.070) | 4/228 | NT | 7.9% | intergenic (+47/‑792) | gyrB/PP_5421 | DNA gyrase subunit B/hypothetical protein |
? | NC_002947 | 15834 = | 48 (0.840) | intergenic (+84/‑755) | gyrB/PP_5421 | DNA gyrase subunit B/hypothetical protein |
GCGCCCCATCAAATCACTTCCTCAAATCCCCCCATCTGCATCATTTTCCAATGAGCGGAGTAGGGCGCCCCGGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/15951‑15797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaCCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAT > NC_002947/15834‑15981 GCGCCCCATCAAATCACTTCCTCAAATCCCCCCATCTGCATCATTTTCCAATGAGCGGAGTAGGGCGCCCCGGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCC < 1:1113060/150‑1 GGAGTAGGGCGCCCCGGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTC < 1:786675/98‑1 GGAGTAGGGCGCCCCGGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTC > 2:786675/1‑98 GGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCG > 1:157467/1‑80 GGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCG < 2:157467/80‑1 TGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTCACCATCAAGCCCGCCTTCGCGGGCTTTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGG > 1:13397/1‑130 TGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTCACCATCAAGCCCGCCTTCGCGGGCTTTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGG < 2:13397/130‑1 TGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGG > 2:718313/1‑150 ATGGTTGAAGCCCGGCCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCT < 1:718313/150‑1 CACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAT < 1:416116/150‑1 GCGCCCCATCAAATCACTTCCTCAAATCCCCCCATCTGCATCATTTTCCAATGAGCGGAGTAGGGCGCCCCGGCAGGAATTCCAGGCAAAAAAAAGCCCGCGAAGGCGGGCTTGATGGTGACCGACAGGGGCCATGGTTGAAGCCCGGCCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/15951‑15797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcaCCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAT > NC_002947/15834‑15981 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |