| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2422987 = | 36 (0.600) | 4 (0.070) | 4/230 | NT | 9.4% | coding (1232/1248 nt) | PP_2124 | glycosyl transferase |
| ? | NC_002947 | 2423036 = | 43 (0.750) | coding (1183/1248 nt) | PP_2124 | glycosyl transferase | |||||
CCTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2423140‑2422987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGG > NC_002947/2423036‑2423127 CCTGGCGCATGAGGCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGC < 1:564258/150‑1CCTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGC < 1:1342226/150‑1CCTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGC > 2:1241272/1‑150 GGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGC > 1:438716/1‑120 GGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGC < 2:438716/120‑1 CCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGG < 1:1255049/146‑1 CCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGG > 2:1255049/1‑146 CGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGT < 1:1345983/88‑1 CGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGT > 2:1345983/1‑88 CCTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2423140‑2422987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGG > NC_002947/2423036‑2423127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |