New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2422987 =	36 (0.600)	4 (0.070)	4/230	NT	9.4%	coding (1232/1248 nt)	PP_2124	glycosyl transferase
	?	NC_002947	2423036 =	43 (0.750)					coding (1183/1248 nt)	PP_2124	glycosyl transferase

CGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGA  >  NC_002947/2422894‑2423178                                                                                                                                               |                                                                                                                                               cGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGt                                                                                                                                         >  2:282663/1‑150 (MQ=255)  ccagttgagcgatgccgggcgccagtttgcccgccagcgccacgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAgg                                                                                                                                            <  1:1255049‑M1/54‑1 (MQ=255)  ccagttgagcgatgccgggcgccagtttgcccgccagcgccacgactggagcgtggctgcccaacaactggagaatgtgcacatacgcctgaCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAgg                                                                                                                                            >  2:1255049‑M1/93‑146 (MQ=255)   gAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                                                                       <  1:835025/150‑1 (MQ=255)     gggCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCAAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAtgt                                                                                                                                     <  1:282663/150‑1 (MQ=255)        ccTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGca                                                                                                                                  >  2:1190177/1‑150 (MQ=255)               gAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGACTGGGTCAGGCGTATGTGCACATtctc                                                                                                                           <  2:110941/150‑1 (MQ=255)                                caCGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTCTGTGCACATTCTCCCGTTCTTGGGCAGCCa                                                                                                          >  2:187601/1‑150 (MQ=255)                                   gCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGc                                                                                                       >  1:1246148/1‑150 (MQ=255)                                     cGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTc                                                                                                     >  2:1109709/1‑150 (MQ=255)                                        aGCAGTGCGACATCGGGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCTTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCGCGCTCCAg                                                                                                  <  1:187601/150‑1 (MQ=255)                                             ggCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTg                                                                                             <  1:1190177/150‑1 (MQ=255)                                                      gTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCg                                                                                    >  1:345783/1‑150 (MQ=255)                                                               aTCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTg                                                                           >  1:1340188/1‑150 (MQ=255)                                                                tCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTgg                                                                          >  1:815092/1‑150 (MQ=255)                                                                tCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTgg                                                                          >  1:1241272/1‑150 (MQ=255)                                                                    cTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                                                                       >  1:905592/1‑85 (MQ=255)                                                                    cTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTAt                                                                                                                                       <  2:905592/85‑1 (MQ=255)                                                                            aGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCg                                                              >  2:163506/1‑150 (MQ=255)                                                                                  ttGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAAc                                                        <  2:815092/150‑1 (MQ=255)                                                                                  ttGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAAc                                                        >  2:1128832/1‑150 (MQ=255)                                                                                  ctGGCTGGGCCGCTCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCCTCGCTCacc                                                        >  2:780480/2‑148 (MQ=255)                                                                                       tGAGCGGCCCAGCCAGGCATTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCt                                                   >  1:352480/1‑150 (MQ=255)                                                                                       tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAg                                                                                                                        >  2:1479624/1‑81 (MQ=255)                                                                                       tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAg                                                                                                                        <  1:1479624/81‑1 (MQ=255)                                                                                       tGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCGGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCt                                                   >  2:1098169/1‑150 (MQ=255)                                                                                         cctgacccaggcggcaccggacgaggccgcgccgctggccagtgcctggctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTgg                                                     >  2:1255049‑M2/55‑146 (MQ=255)                                                                                         cctgacccaggcggcaccggacgaggccgcgccgctggccagtgcctggctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTgg                                                     <  1:1255049‑M2/92‑1 (MQ=255)                                                                                          gCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCAt                                                >  1:247099/1‑150 (MQ=255)                                                                                            ggCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATgc                                              <  2:905660/150‑1 (MQ=255)                                                                                                  GCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGcc                                                                      >  1:438716‑M1/1‑120 (MQ=255)                                                                                                  GCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGcc                                                                      <  2:438716‑M1/120‑1 (MQ=255)                                                                                                  GCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAgg                                        >  2:1241272‑M1/1‑150 (MQ=255)                                                                                                  GCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAgg                                        <  1:1342226‑M1/150‑1 (MQ=255)                                                                                                  GCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGCCTCATGCGCCAgg                                        <  1:564258‑M1/150‑1 (MQ=255)                                                                                                         aCTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGAtt                                 <  2:884338/150‑1 (MQ=255)                                                                                                          cggacgaggccgcgccgctggccagtgcctggctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGt                                                                                              >  2:1345983‑M2/38‑88 (MQ=255)                                                                                                          cggacgaggccgcgccgctggccagtgcctggctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGt                                                                                              <  1:1345983‑M2/51‑1 (MQ=255)                                                                                                           tGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGa                               <  2:345783/150‑1 (MQ=255)                                                                                                            ggCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGag                              <  2:1340188/150‑1 (MQ=255)                                                                                                              ccAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGagca                            >  2:115452/1‑150 (MQ=255)                                                                                                                 gcggcgcggcCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCt                         >  1:901662/1‑150 (MQ=255)                                                                                                                   ggcgcggcCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTgg                       <  1:1098169/150‑1 (MQ=255)                                                                                                                        ggcCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGCTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCACGGCTGATTGAACACCTGGGTGAt                  >  2:29918/1‑150 (MQ=255)                                                                                                                          ccTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTCGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCa                <  1:115452/150‑1 (MQ=255)                                                                                                                           cTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAg               <  2:247099/150‑1 (MQ=255)                                                                                                                            tCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGc              >  2:1576177/1‑150 (MQ=255)                                                                                                                              gTCCGGTGCCGCCTGGGTCGGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTgg                                                                                            >  1:1527241/1‑70 (MQ=255)                                                                                                                              gTCCGGTGCCGCCTGGGTCGGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTgg                                                                                            <  2:1527241/70‑1 (MQ=255)                                                                                                                              gTCCGGTGCCGCCCGGGTCAGGAGTATGTGCCCACTCTCCGGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCaa            <  2:834793/150‑1 (MQ=255)                                                                                                                               tCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAAt           <  1:1576177/150‑1 (MQ=255)                                                                                                                               tCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAAt           <  2:1246148/150‑1 (MQ=255)                                                                                                                                   gTGCCGCCTGGGACAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCa       <  2:352480/150‑1 (MQ=255)                                                                                                                                    tGCCGACTGGGGCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAg      <  1:186874/150‑1 (MQ=255)                                                                                                                                     gccgccTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGt     <  2:901662/150‑1 (MQ=255)                                                                                                                                        gccTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGa  >  2:635972/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                               CGGAGGGCCTGGTGGAAGTGCGTGAAGGCAGCACGCCGAAGCAGGGCGACATCGTGCCATTCATCCCCTTCAGCGAGCTACTTGGCTGAGCGGCCCAGCCAGGCACTGGCCAGCGGCGCGGCCTCGTCCGGTGCCGCCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGA  >  NC_002947/2422894‑2423178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.