New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4257932 = | 62 (1.040) | 4 (0.070) | 4/236 | NT | 6.3% | coding (450/645 nt) | PP_3731 | TetR family transcriptional regulator |
? | NC_002947 | 4257962 = | 59 (1.000) | coding (420/645 nt) | PP_3731 | TetR family transcriptional regulator |
CTGCGCCGAGCTGCTCGACCCGCAATTGCTCGATGCCTGGCTGGCTTTCTGGGGGGCGGTGAAGACCGCCGACGCGATCAACCAGGTGCACGACCACTCCTACGGCGAGTACCGCAACGAACTTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4258082‑4257932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGC > NC_002947/4257962‑4257995 CTGCGCCGAGCTGCTCGACCCGCAATTGCTCGATGCCTGGCTGGCTTTCTGGGGGGCGGTGAAGACCGCCGACGCGATCAACCAGGTGCACGACCACTCCTACGGCGAGTACCGCAACGAACTTGGCCAGCTACTGGCCAG‑‑GCTGGCCGA < 2:848059/150‑1 GGCTGGCTTTCTGGGGGGCGGTGAAGACCGCCGACGCGATCAACCAGGTGCACGACCACTCCTACGGCGAGTACCGCAACGAACTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTA > 1:1500505/1‑134 GGCTGGCTTTCTGGGGGGCGGTGAAGACCGCCGACGCGATCAACCAGGTGCACGACCACTCCTACGGCGAGTACCGCAACGAACTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTA < 2:1500505/134‑1 TTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGC < 1:1083813/63‑1 TTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGC > 2:1083813/1‑63 CTGCGCCGAGCTGCTCGACCCGCAATTGCTCGATGCCTGGCTGGCTTTCTGGGGGGCGGTGAAGACCGCCGACGCGATCAACCAGGTGCACGACCACTCCTACGGCGAGTACCGCAACGAACTTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4258082‑4257932 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGC > NC_002947/4257962‑4257995 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |