New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4257932 =	62 (1.040)	4 (0.070)	4/236	NT	6.3%	coding (450/645 nt)	PP_3731	TetR family transcriptional regulator
	?	NC_002947	4257962 =	59 (1.000)					coding (420/645 nt)	PP_3731	TetR family transcriptional regulator

ACCCAGGCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCGGGTCGAGCAGCTCGGCG  >  NC_002947/4257792‑4258079                                                                                                                                             |                                                                                                                                                      aCCCAGGCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCCAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGc                                                                                                                                              <  2:918787/150‑1 (MQ=255)   ccAGGCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑Ct                                                                                                                                          >  1:14893/1‑150 (MQ=255)     aGGCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTgg                                                                                                                                        >  1:872586/1‑150 (MQ=255)      ggCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGc                                                                                                                                       <  2:886123/150‑1 (MQ=255)         cTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAg                                                                                                                                    <  1:859669/150‑1 (MQ=255)             cAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGc                                                                                                                                >  2:927978/1‑150 (MQ=255)                atgatCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTgg                                                                                                                             >  2:1200654/1‑150 (MQ=255)                   atCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCa                                                                                                                          <  2:313952/150‑1 (MQ=255)                    tCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCaa                                                                                                                         <  2:1375912/150‑1 (MQ=255)                        gCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCCGGCTGATTGCCGCCAGGTCGGCATCGAAGGCCTGCCAGCCCTCCTCCGCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTc                                                                                                                     >  1:521815/1‑150 (MQ=255)                           cTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGt                                                                                                                   >  1:269667/1‑149 (MQ=255)                           cTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGt                                                                                                                   <  2:269667/149‑1 (MQ=255)                            tGCGCGGGGGTGAAGGTGCGGGGGTTCGGGCCCGATGCCAGCCACAGGCCAGCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTg                                                                                                                 <  2:14893/150‑1 (MQ=255)                              cTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCg                                                                                                               <  1:1087932/150‑1 (MQ=255)                               tCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCgg                                                                                                              <  2:849476/150‑1 (MQ=255)                               tCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCgg                                                                                                              >  1:214310/1‑150 (MQ=255)                                  ggggTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTAc                                                                                                           <  2:872586/150‑1 (MQ=255)                                     gTGAAGGTGCCGGGGATCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGGTGCGGTACTCg                                                                                                        >  1:433463/1‑150 (MQ=255)                                        aaGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCg                                                                                                     <  2:1391824/150‑1 (MQ=255)                                         aGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGcc                                                                                                      <  1:1622514/148‑1 (MQ=255)                                         aGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGcc                                                                                                      >  2:1622514/1‑148 (MQ=255)                                             gCCGGGGTGCAGGCCCGACTCCAGCCAGAGGCCATCAAGCAAGGCGCGCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑ATGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGa                                                                                                <  2:214310/150‑1 (MQ=255)                                              ccGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCgg                                                                                                                                                   <  2:1383506/100‑1 (MQ=255)                                              ccGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCgg                                                                                                                                                   >  1:1383506/1‑100 (MQ=255)                                               cGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGc                                                                                                                                       >  1:37299/1‑109 (MQ=255)                                               cGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGc                                                                                                                                       <  2:37299/109‑1 (MQ=255)                                                   gTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTc                                                                                          >  1:946756/1‑150 (MQ=255)                                                      cAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGACCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTg                                                                                       >  1:274955/1‑150 (MQ=255)                                                         gCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGATTGGTCGTGCAc                                                                                    >  1:1154130/1‑150 (MQ=255)                                                             gACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTgg                                                                                <  1:1595436/150‑1 (MQ=255)                                                             gACGCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCATCTgg                                                                                <  1:898929/150‑1 (MQ=255)                                                                tCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTg                                                                             >  1:187517/1‑150 (MQ=255)                                                                   aGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATc                                                                          <  2:1049873/150‑1 (MQ=255)                                                                     ccACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATcgc                                                                        >  2:802408/1‑150 (MQ=255)                                                                      cacaGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATcgcg                                                                       >  1:397761/1‑150 (MQ=255)                                                                       acaGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGc                                                                                                                                       >  2:1094382/1‑85 (MQ=255)                                                                       acaGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGc                                                                                                                                       <  1:1094382/85‑1 (MQ=255)                                                                         aGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCTCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTcg                                                                    >  1:1607353/1‑150 (MQ=255)                                                                           gCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTcggc                                                                  >  1:916910/1‑150 (MQ=255)                                                                                 aagcaagGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCtt                                                            >  2:1295849/1‑150 (MQ=255)                                                                                   gcaagGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCa                                                          >  2:1399926/1‑150 (MQ=255)                                                                                     aagGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTgg                                                                                            <  2:6238/114‑1 (MQ=255)                                                                                     aagGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTgg                                                                                            >  1:6238/1‑114 (MQ=255)                                                                                        gcgcTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGcc                                                     >  1:1414246/1‑150 (MQ=255)                                                                                              aGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTc                                                           <  2:907010/138‑1 (MQ=255)                                                                                              aGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTc                                                           >  1:907010/1‑138 (MQ=255)                                                                                                 cTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGaaa                                            <  1:1614233/150‑1 (MQ=255)                                                                                                    aTGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAagcc                                         >  2:1161150/1‑150 (MQ=255)                                                                                                     tGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAagcca                                        <  1:802408/150‑1 (MQ=255)                                                                                                     tGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCCTCGGAGGTCTTCACCGCCCCCCGGAAggcct                                        <  2:767307/150‑2 (MQ=255)                                                                                                          gccAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGccagccag                                   <  2:274955/150‑1 (MQ=255)                                                                                                           gcacgaccactcctacggcgagtaccgcaacgaaCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCaa                                                                                                                         >  2:1083813‑M1/35‑63 (MQ=255)                                                                                                           gcacgaccactcctacggcgagtaccgcaacgaaCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCaa                                                                                                                         <  1:1083813‑M1/29‑1 (MQ=255)                                                                                                              ggTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGc                                                                                                       >  2:1346176/1‑78 (MQ=255)                                                                                                              ggTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGc                                                                                                       <  1:1346176/78‑1 (MQ=255)                                                                                                               gTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATc                              <  2:916910/150‑1 (MQ=255)                                                                                                                tCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCg                             >  2:499365/1‑150 (MQ=255)                                                                                                                   gCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGc                          >  2:1356874/1‑150 (MQ=255)                                                                                                                   gCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTATTCACCGCCCCCCGGAAAGCCAGCCAGGCATCGAGc                          >  2:1249647/1‑150 (MQ=255)                                                                                                                     aTCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCaa                        >  2:312564/1‑150 (MQ=255)                                                                                                                        tacggcgagtaccgcaacgaaCTTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAagccagcc                                     <  2:1500505‑M1/113‑1 (MQ=255)                                                                                                                        tacggcgagtaccgcaacgaaCTTGGCCAGCTACTGGCCAG‑‑GCTGGCCGAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAagccagcc                                     >  1:1500505‑M1/22‑134 (MQ=255)                                                                                                                          aGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCg                   <  1:1295849/150‑1 (MQ=255)                                                                                                                           gCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCGAATTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCgg                  <  1:927978/150‑1 (MQ=255)                                                                                                                                gCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCGGGTCGa             <  1:1356874/150‑1 (MQ=255)                                                                                                                                    gCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGtt                                                                              >  2:172153/1‑81 (MQ=255)                                                                                                                                    gCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGtt                                                                              <  1:172153/81‑1 (MQ=255)                                                                                                                                     cccTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCGGGTCGagcagc        <  1:499365/150‑1 (MQ=255)                                                                                                                                        tcctcctcGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCGGGTCGAGCAGCTCg     <  1:1399926/150‑1 (MQ=255)                                                                                                                                          ctcctcGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGtt                                                                              <  1:1272622/75‑1 (MQ=255)                                                                                                                                          ctcctcGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGtt                                                                              >  2:1272622/1‑75 (MQ=255)                                                                                                                                           tcctcGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGGGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGCCCAATTCCGTGTCGAGCAACCCGgcg  >  2:942453/1‑150 (MQ=255)                                                                                                                                             |                                                                                                                                                      ACCCAGGCCTCGCAGATGATCACGCCCTGCTCGGGGGTGAAGGTGCCGGGGTTCAGGCCCGACTCCAGCCACAGGCCATCAAGCAAGGCGCTCAGGCTGATGGCCGCCAGGTCGGCATCGAAGCCCTGCCAGCCCTCCTCCTCGGCCAGC‑‑CTGGCCAGTAGCTGGCCAAGTTCGTTGCGGTACTCGCCGTAGGAGTGGTCGTGCACCTGGTTGATCGCGTCGGCGGTCTTCACCGCCCCCCAGAAAGCCAGCCAGGCATCGAGCAATTGCGGGTCGAGCAGCTCGGCG  >  NC_002947/4257792‑4258079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.