New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5595982 | 58 (0.970) | 3 (0.050) | 3/230 | NT | 5.2% | coding (148/1881 nt) | thiC | phosphomethylpyrimidine synthase |
? | NC_002947 | = 5596006 | 54 (0.940) | coding (124/1881 nt) | thiC | phosphomethylpyrimidine synthase |
TCGGTGTCACCGCGGGCTTCGATCCACGCCGAACGCACATCGGGCAGGCCTTTGCGCACGTCGATGATCACGTCGGGGTCGGTGTACGGGCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCGCCGCCGAAATCGGTCGGGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5595831‑5595982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCGATTTCGGCGGCGAGTCCAA < NC_002947/5596006‑5595951 TCGGTGTCACCGCGGGCTTCGATCCACGCCGAACGCACATCGGGCAGGCCTTTGCGCACGTCGATGATCACGTCGGGGTCGGTGTACGGGCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCGCCGCCGAAATCGGTCGGGGTG > 2:778346/1‑150 GCACATCGGGCAGGCCTTTGCGCACGTCGATGATCACGTCGGGGTCGGTGTACGGGCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCGCCGCCGAAATCGGTCGGGGTGTCCCCATGCGTGAAATCAGCCTGGATGACACCCC < 2:1022420/150‑1 GCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCGCCGCCGAAATCGGTCGGGGTGTCCCCATGCGTGAAATCAGCCTGGATGACAC < 1:454990/92‑1 GCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCACCGCCGAAATCGGTCGGGGTGTCCCCATGCGTGAAATCAGCCTGGATGACAC > 2:454990/1‑92 TCCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCGATTTCGGCGGCGAGTCCAA < 1:319919/58‑1 TCCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCGATTTCGGCGGCGAGTCCAA > 2:319919/1‑58 TCGGTGTCACCGCGGGCTTCGATCCACGCCGAACGCACATCGGGCAGGCCTTTGCGCACGTCGATGATCACGTCGGGGTCGGTGTACGGGCCAGACGTGTCATACACCAGCACCGGGGCGTTGGACTCGCCGCCGAAATCGGTCGGGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5595831‑5595982 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcCCCATGCGTGAAATCAGCCTGGATGACACCCCGACCGATTTCGGCGGCGAGTCCAA < NC_002947/5596006‑5595951 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |