New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5739225 = | 53 (0.890) | 4 (0.070) | 4/234 | NT | 7.4% | coding (99/1365 nt) | hutF | formiminoglutamate deiminase |
? | NC_002947 | 5739261 = | 49 (0.840) | coding (135/1365 nt) | hutF | formiminoglutamate deiminase |
GGTCTCGCCAGGTCCAGAAACTGTCGTTGGGGTTGCCGGCGACTTCCGCCAGGCCTGCCATGGCGCGCTGGAAGGCATGCGAGTGCAGGTTGGGCATGCCGGGCAGCAGCGGGCCGGCCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5739376‑5739225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGGCCCGCTGCTGCCCGGCATGCCCAACCTGCACTCGCATGCCTTCCAGCGCGCCATGGCAGGCCTGGCGGAAGTCGCCGGCAACCCCAACGACA > NC_002947/5739261‑5739355 GGTCTCGCCAGGTCCAGAAACTGTCGTTGGGGTTGCCGGCGACTTCCGCCAGGCCTGCCATGGCGCGCTGGAAGGCATGCGAGTGCAGGTTGGGCATGCCGGGCAGCAGCGGGCCGGCCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAG < 2:1117447/150‑1 GGCCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGCCGGCCCGCTGCTGCCCGGCATGCCCAACCTGCACTCGCATGCCTTCCAGCGCGCCATGGCAGGCCTGGCGGAAGTCGCCGGCAACCCCAACGACA < 1:143996/132‑1 GGCCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGCCGGCCCGCTGCTGCCCGGCATGCCCAACCTGCACTCGCATGCCTTCCAGCGCGCCATGGCAGGCCTGGCGGAAGTCGCCGGCAACCCCAACGACA > 2:143996/1‑132 CCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGCCGGCCCGCTGCTGCCCGGCATGC < 1:1225990/58‑1 CCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGCCGGCCCGCTGCTGCCCGGCATGC > 2:1225990/1‑58 GGTCTCGCCAGGTCCAGAAACTGTCGTTGGGGTTGCCGGCGACTTCCGCCAGGCCTGCCATGGCGCGCTGGAAGGCATGCGAGTGCAGGTTGGGCATGCCGGGCAGCAGCGGGCCGGCCAGGCGCTCGGCGTCTTCGGCCGAAGCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5739376‑5739225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGGCCCGCTGCTGCCCGGCATGCCCAACCTGCACTCGCATGCCTTCCAGCGCGCCATGGCAGGCCTGGCGGAAGTCGCCGGCAACCCCAACGACA > NC_002947/5739261‑5739355 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |