New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	742007 =	NA (NA)	5 (0.090)	5/226	NT	NA	coding (105/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	1426180 =	NA (NA)					coding (71/1422 nt)	PP_1250	group II intron‑encoding maturase

ACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAACGC  >  NC_002947/741966‑742115                                          |                                                                                                             acggTCACCCCCAGCTACGGCCAGAACCAGCGGGTGACTCTTGACATTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAAcgc  <  2:429452/147‑1 (MQ=1)                                          |                                                                                                             ACTGTCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAACGC  >  NC_002947/741966‑742115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.