New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3560251	61 (1.020)	4 (0.070)	4/230	NT	6.1%	intergenic (‑109/‑38)	PP_3143/tdcG‑III	LysR family transcriptional regulator/L‑serine dehydratase
	?	NC_002947	= 3560272	65 (1.130)					intergenic (‑130/‑17)	PP_3143/tdcG‑III	LysR family transcriptional regulator/L‑serine dehydratase

ACATCTGACCATTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGTGAGC  >  NC_002947/3560115‑3560397                                                                                                                                         |                                                                                                                                                     aCATCTGACCATTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCAt                                                                                                                                        <  2:255389/150‑1 (MQ=255)      tGACCATTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcag                                                                                                                                   >  2:235082/1‑150 (MQ=255)       gACCATTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcagg                                                                                                                                  >  1:1492043/1‑150 (MQ=255)           aTTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTg                                                                                                                                                <  2:687501/133‑1 (MQ=255)           aTTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTg                                                                                                                                                >  1:687501/1‑133 (MQ=255)           aTTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcaggg                                                                                                                                 <  2:1262012/147‑1 (MQ=255)           aTTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcaggg                                                                                                                                 >  1:1262012/1‑147 (MQ=255)            ttGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCagg                                                                                                                             >  1:1471037‑M2/1‑147 (MQ=255)                     cgtcgCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCAt                                                                                                                    <  2:398597/150‑1 (MQ=255)                           aTCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCAt                                                                                                              >  2:1040177/1‑150 (MQ=255)                               tttAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCt                                                                                                          >  2:1439103/1‑150 (MQ=255)                               tttAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCt                                                                                                          >  2:416750/1‑150 (MQ=255)                                 tAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTAt                                                                                                        <  1:1439103/150‑1 (MQ=255)                                   gTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCa                                                                                                      <  1:551399/150‑1 (MQ=255)                                    tACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCa                                                                                                      <  2:206641/149‑1 (MQ=255)                                    tACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCa                                                                                                      >  1:206641/1‑149 (MQ=255)                                      ccACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTGCCCTGACATGCATC‑CAGGGTagggttgtctga                                                                                                                    <  1:938237‑M2/133‑13 (MQ=255)                                      ccACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTGCCCTGACATGCATC‑CAGGGTagggttgtctga                                                                                                                    >  2:938237‑M2/1‑121 (MQ=255)                                      ccACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGAATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAgtg                                                                                                   >  2:386241/1‑150 (MQ=255)                                       cACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCaggg                                                                                                                            >  1:181077‑M2/1‑120 (MQ=255)                                       cACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCaggg                                                                                                                            <  2:181077‑M2/124‑5 (MQ=255)                                         cTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGttt                                                                                                >  2:213696/1‑150 (MQ=255)                                          tAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGtttt                                                                                               >  2:111314/1‑150 (MQ=255)                                          tAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGtttt                                                                                               >  1:230960/1‑150 (MQ=255)                                           aaaGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTc                                                                                              <  2:230960/150‑1 (MQ=255)                                           aaaGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTc                                                                                              <  1:213696/150‑1 (MQ=255)                                             aGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGa                                                                                            <  2:1492043/150‑1 (MQ=255)                                                     ttAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGCTCCGACATTAGCATGGCTATCAGTGTTTTCGACCTTTTCa                                                                                    >  1:85113/1‑150 (MQ=255)                                                             tttCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGc                                                                            >  1:1479380/1‑150 (MQ=255)                                                                           cGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCAt                                                                                                                    >  2:140641/1‑96 (MQ=255)                                                                           cGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCAt                                                                                                                    <  1:140641/96‑1 (MQ=255)                                                                            gTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCGTGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCaaaa                                                                                 <  2:1358344/130‑1 (MQ=255)                                                                            gTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCGTGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCaaaa                                                                                 >  1:1358344/1‑130 (MQ=255)                                                                               aGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAAtt                                                                               >  1:550762/1‑129 (MQ=255)                                                                               aGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAAtt                                                                               <  2:550762/129‑1 (MQ=255)                                                                               aGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTct                                                          <  1:235082/150‑2 (MQ=255)                                                                               aGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTcc                                                          <  1:1171677/150‑1 (MQ=255)                                                                                 ccAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcagggta                                                                                                                               >  1:1437800/1‑77 (MQ=255)                                                                                 ccAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTcagggta                                                                                                                               <  2:1437800/79‑3 (MQ=255)                                                                                     cgcgGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATAcc                                                   <  1:111314/150‑1 (MQ=255)                                                                                        ggCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTc                                                >  2:1417373/1‑150 (MQ=255)                                                                                        ggCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTc                                                >  2:1516128/1‑150 (MQ=255)                                                                                         gCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCg                                               <  1:552051/150‑1 (MQ=255)                                                                                            gTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCGAGtt                                                            >  1:83375/1‑135 (MQ=255)                                                                                            gTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGtt                                                            <  2:83375/135‑1 (MQ=255)                                                                                                   gcatagtCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATgcg                                     >  2:882368/7‑150 (MQ=255)                                                                                                         tCGCAATACCACTCCATTTCTTAAGCCATCCATACACTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCgcggc                               <  2:85113/150‑1 (MQ=255)                                                                                                         tCGCAATAACACTCAATTTCTTCAGACAACCCTgccctgacatgcatccagggtaggg                                                                                                                             <  2:76753‑M1/58‑26 (MQ=255)                                                                                                         tCGCAATAACACTCAATTTCTTCAGACAACCCTgccctgacatgcatccagggtaggg                                                                                                                             >  1:76753‑M1/1‑33 (MQ=255)                                                                                                           gCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCGGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGcggcgg                             >  1:856396/1‑150 (MQ=255)                                                                                                                   acTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCaaaa                                                                                 <  1:49236/91‑1 (MQ=255)                                                                                                                   acTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCaaaa                                                                                 >  2:49236/1‑91 (MQ=255)                                                                                                                   acTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCttt                     >  2:1346890/1‑150 (MQ=255)                                                                                                                    cTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTg                    >  1:259317/1‑150 (MQ=255)                                                                                                                     tCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGc                   >  1:299676/1‑150 (MQ=255)                                                                                                                     tCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGc                   >  1:472596/1‑150 (MQ=255)                                                                                                                       aaTTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTgg                                                                             >  2:881133/1‑91 (MQ=255)                                                                                                                       aaTTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTgg                                                                             <  1:881133/91‑1 (MQ=255)                                                                                                                       aaTTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑Ca                                                       <  1:401000/112‑1 (MQ=255)                                                                                                                       aaTTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑Ca                                                       >  2:401000/1‑112 (MQ=255)                                                                                                                       aaTTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGccc                 >  1:716804/1‑150 (MQ=255)                                                                                                                         tttCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAg               <  2:716804/150‑1 (MQ=255)                                                                                                                              tcAGACAACCCTaccctggatgcatgtcagggcagggttgtctgaagaaattgagtgttattgcgattttgcgcgatactgccgcgctggctcacggatgaccaacgaaacttcctaagcaagcctttagtgg                             <  1:938237‑M1/133‑122 (MQ=255)                                                                                                                              tcAGACAACCCTaccctggatgcatgtcagggcagggttgtctgaagaaattgagtgttattgcgattttgcgcgatactgccgcgctggctcacggatgaccaacgaaacttcctaagcaagcctttagtgg                             >  2:938237‑M1/1‑12 (MQ=255)                                                                                                                              tcAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCttt          <  1:416750/150‑1 (MQ=255)                                                                                                                                  aCAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGt      >  1:423345/1‑150 (MQ=255)                                                                                                                                  aCAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGt      >  1:113004/1‑150 (MQ=255)                                                                                                                                  aCAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGt      <  2:259317/150‑1 (MQ=255)                                                                                                                                    aaCCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATa                                                     >  2:471365/1‑101 (MQ=255)                                                                                                                                    aaCCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑AATa                                                     <  1:471365/101‑1 (MQ=255)                                                                                                                                     accctaccctGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGTGAg   <  1:1516128/150‑1 (MQ=255)                                                                                                                                      ccctgccctgacatgcatccagggtagggttgtctgaagaaattgagtgttattgcgattttgcgcgatactgccgcgctggctcacggatgaccaacgaaacttcctaagcaagcctttagtg                              <  2:181077‑M1/124‑121 (MQ=255)                                                                                                                                      ccctgccctgacatgcatccagggtagggttgtctgaagaaattgagtgttattgcgattttgcgcgatactgccgcgctggctcacggatgaccaacgaaacttcctaagcaagcctttagtg                              >  1:181077‑M1/1‑4 (MQ=255)                                                                                                                                      ccctaccctGG‑ATGCATGTCAGGGCagggttgtctgaagaaattgagtgttattgcga                                                                                               >  1:76753‑M2/1‑25 (MQ=255)                                                                                                                                      ccctaccctGG‑ATGCATGTCAGGGCagggttgtctgaagaaattgagtgttattgcga                                                                                               <  2:76753‑M2/58‑34 (MQ=255)                                                                                                                                      ccctaccctGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTNTCAGTGTTTTCAAACTTTTGAAAATTAGCGT‑GCGCCAAGTGATGCCTCAGGCCGTTGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGTGAGc  >  1:529485/1‑150 (MQ=255)                                                                                                                                       cctgccctgacatgcatccagggtagggttgtctgaagaaattgagtgttattgcgattttgcgcgatactgccgcgctggctcacggatgaccaacgaaacttcctaagcaagcctttagtggtactaaacgatgcgacgacaactcaa   >  1:1471037‑M1/1‑3 (MQ=255)                                                                                                                                         taccctGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGa                                         >  1:1453477/1‑108 (MQ=255)                                                                                                                                         taccctGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGa                                         <  2:1453477/108‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                     ACATCTGACCATTGAGTTGTCGTCGCATCGTTTAGTACCACTAAAGGCTTGCTTAGGAAGTTTCGTTGGTCATCCGTGAGCCAGCGCGGCAGTATCGCGCAAAATCGCAATAACACTCAATTTCTTCAGACAACCCTACCCTGG‑ATGCATGTCAGGGCAGGGTCAGGCATTAGCATGGCTATCAGTGTTTTCGACCTTTTCAAAATTGGCATCGGGCCGTCCAGTTCC‑CATACCGTCGGCCCGATGCGCGCGGCGGCCACCTTTGCCCAGGCTTTGCGTGAGC  >  NC_002947/3560115‑3560397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.