| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5542782 = | 49 (0.820) | 3 (0.050) | 3/240 | NT | 5.9% | intergenic (‑36/+78) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 |
| ? | NC_002947 | 5542816 = | 47 (0.790) | intergenic (‑70/+44) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 | |||||
GTTGTCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTACGTCG > NC_002947/5542633‑5542926 | gttgtCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACaaa > 1:455242/1‑150 (MQ=255) ttgtCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAg < 2:405789/150‑1 (MQ=255) tCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGc < 2:314575/150‑1 (MQ=255) cAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCAc > 1:465293/1‑150 (MQ=255) cATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGAAGAAAAAGACAAAGGGCACGGc > 1:338162/1‑150 (MQ=255) cATCAGCACTCCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGc < 1:135458/150‑1 (MQ=255) ggCCACCGAGCACGGCCTGTTCGGCCTCGACAGAGCGCGGCGCTCACACCACGG‑TGCGCAGTGCCAGGCTGATGAGGGCGGAGGTGGTGATCTCGTTGATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTc > 1:29818/1‑150 (MQ=255) cGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTATATAGGGTGAAAAAGACAAAGGGCACGGCCTGTCGAAAAc > 1:499408/1‑150 (MQ=255) cGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTACGTGGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAAc > 1:367312/1‑150 (MQ=255) gAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACa < 2:699479/150‑1 (MQ=255) gAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGGTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACa < 2:678745/150‑1 (MQ=255) gAGCACGGCCTGTTCGGCATCGATGGAATGGGGCTGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACa < 2:499408/150‑1 (MQ=255) gCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGt < 2:465293/150‑1 (MQ=255) ccTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTTCGTTTTG‑CAGGTCAAGCTGTTCGGAGGTGTTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTg < 1:591517/150‑1 (MQ=255) cTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGc < 2:29818/150‑1 (MQ=255) cTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGc < 2:455242/150‑1 (MQ=255) cGGCCTCGATGGAATGCGGCGGTAGCCTCAGGTCTGCGTTGTG‑CAGGTCAAGCAGTCCGCGGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGAt < 1:1251976/150‑1 (MQ=255) acgtagccgtgcacctgcacagcgacgttgaagccaccgtacgcgtggtcgtcgtagctgcctaagctgcgctaactggctggctccttgcgagtcaggcggttaacatAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTaa > 1:1551955‑M1/110‑150 (MQ=255) tGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGAc > 2:1442106/1‑150 (MQ=255) aCCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAg > 2:1042406/1‑114 (MQ=255) aCCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAg < 1:1042406/114‑1 (MQ=255) ttCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGtt > 2:1044059/1‑127 (MQ=255) ttCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGtt < 1:1044059/127‑1 (MQ=255) ttCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGagcc > 2:815382/1‑150 (MQ=255) aGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGagccagc < 2:367312/150‑1 (MQ=255) g‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTCTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGGCTCGCAAGGAGCCAGCCAGTTAGCGCAGc < 2:1181418/150‑1 (MQ=255) gTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAgc > 2:1159431/1‑141 (MQ=255) gTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAgc < 1:1159431/141‑1 (MQ=255) tCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAgg < 1:815382/150‑1 (MQ=255) tCAAGCTGTTCGGAGGTGGTGAGCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAgg < 2:260456/150‑1 (MQ=255) gtcgtagctgcctaagctgcgctaactggctggctccttgcgagtcaggcggttaacatAGGGCACGGCCTGTCGAAAACAGGACCGTGc > 1:395780‑M1/60‑90 (MQ=255) gtcgtagctgcctaagctgcgctaactggctggctccttgcgagtcaggcggttaacatAGGGCACGGCCTGTCGAAAACAGGACCGTGc < 2:395780‑M1/31‑1 (MQ=255) cGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTacgac < 2:926142/150‑1 (MQ=255) aGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACgacgac > 2:946443/1‑150 (MQ=255) gtgATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGGGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGTGCTGCTTTGTCAGCTACGACGACCAcgc < 2:338162/150‑1 (MQ=255) gATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGt > 2:1279943/1‑150 (MQ=255) ttCATGGCCACGAAAGAATTCTGGAGGATGAACAACAACACGCGTACAGCCTGTCGAAAACAGGACCGTGCCCCTTTTCAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTgg < 1:1186019/150‑1 (MQ=255) tGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTc > 2:23782/1‑88 (MQ=255) tGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTc < 1:23782/88‑1 (MQ=255) ccACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAAc > 2:616080/1‑150 (MQ=255) cGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTTGCTTCAACGTc > 1:743458/1‑150 (MQ=255) gAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAg > 2:972187/1‑86 (MQ=255) gAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAg < 1:972187/86‑1 (MQ=255) gAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAgg < 2:1145150/112‑1 (MQ=255) gAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAgg > 1:1145150/1‑112 (MQ=255) gAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCtgt > 2:1139473/1‑150 (MQ=255) aaTTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCtgtg > 1:922174/1‑150 (MQ=255) tGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGt < 2:743458/150‑1 (MQ=255) ggaggaTGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAg < 2:852735/75‑1 (MQ=255) ggaggaTGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAg > 1:852735/1‑75 (MQ=255) gaggaTGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGc > 1:482497/1‑150 (MQ=255) ggaTGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCAc < 1:946443/150‑1 (MQ=255) gaTGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACg < 1:1442106/150‑1 (MQ=255) aaaaGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAgc > 2:1488188/1‑82 (MQ=255) aaaaGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAgc < 1:1488188/82‑1 (MQ=255) gACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGGCGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTAcgtcg < 1:292693/150‑1 (MQ=255) gACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTAcgtcg > 1:1134576/1‑150 (MQ=255) | GTTGTCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTG‑CAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGCCTGTCGAAAACAGGACCGTGCCCGATGTTAACCGCCTGACTCGCAAGGAGCCAGCCAGTTAGCGCAGCTTAGGCAGCTACGACGACCACGCGTACGGTGGCTTCAACGTCGCTGTGCAGGTGCACGGCTACGTCG > NC_002947/5542633‑5542926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |