New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5596996 =	61 (1.020)	3 (0.050)	3/234	NT	4.6%	coding (446/1434 nt)	PP_4923	outer membrane efflux protein
	?	NC_002947	5597018 =	64 (1.100)					coding (468/1434 nt)	PP_4923	outer membrane efflux protein
Rejected: Frequency below/above cutoff threshold.

CCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGGCCAACCGGATCATCGCCGAACGCCAG  >  NC_002947/5596871‑5597165                                                                                                                                                    |                                                                                                                                                    ccGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGccac                                                                                                                                                   <  1:889522/150‑1 (MQ=255)       tGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGATGTAGGCGACCGAGCAAGACGAGCAGCAGGGCACGGCACACAGCTACTTCGCCGTCCTCCGCGCCCAGGACAACTTGACCGCGACCAAGGc                                                                                                                                             >  1:372392/1‑150 (MQ=255)           cGCTGGTTCCAGTTGCACGCCGCCGAAGCAGTCAACGAACACGCAGCTGTGCAGCTGTCAGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                                                         <  2:1591588/150‑1 (MQ=255)                 ttCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAgcc                                                                                                                                   >  1:465614/1‑150 (MQ=255)                 ataactggcttgggattgccgcacgtcggtcttgtccgaaaggcccacgtcgaaacgctcgttggactgatccagctggcgcttgaaggcggcttcttctgccttggtggcgcccaggacaacctggccgcCACCAAGGCAGAAGAAgcc                                                                                                                                   <  1:902575‑M2/19‑1 (MQ=255)                     aGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCt                                                                                                                               >  2:1340549/1‑150 (MQ=255)                       ttGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTc                                                                                                                             <  1:1485222/150‑1 (MQ=255)                         gCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAACACCTGCTCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCCCGCCCAGGACAACCTGGCCGCAGCCACGGCAGAAGAGGACGCCTTCag                                                                                                                           >  2:352634/1‑149 (MQ=255)                         gCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCaa                                                                                                                           <  1:1340549/150‑1 (MQ=255)                           aaGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAgc                                                                                                                         <  2:465614/150‑1 (MQ=255)                           aaGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAgc                                                                                                                         <  1:1486252/150‑1 (MQ=255)                                      gCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGAt                                                                                                              <  1:1066630/150‑1 (MQ=255)                                      gCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGAt                                                                                                              <  1:1429630/150‑1 (MQ=255)                                       cAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATc                                                                                                             <  2:486661/150‑1 (MQ=255)                                        tgTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGCTGAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCa                                                                                                            <  1:1251263/149‑1 (MQ=255)                                               gAACAGTCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAAc                                                                                                     >  2:636391/1‑150 (MQ=255)                                               gAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAAc                                                                                                     >  2:945772/1‑150 (MQ=255)                                                    ggCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                                          >  1:241941/1‑140 (MQ=255)                                                    ggCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                                          <  2:241941/140‑1 (MQ=255)                                                         cccTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCg                                                                                           >  1:1417707/1‑150 (MQ=255)                                                                   gTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACGTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCt                                                                                 <  1:352634/150‑1 (MQ=255)                                                                    tCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGc                                                                                                 <  1:49859/133‑1 (MQ=255)                                                                    tCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGc                                                                                                 >  2:49859/1‑133 (MQ=255)                                                                    gaaacgctcgttggactgatccagctggcgcttgaaggcggcttcttctgccttggtggcgcccaggacaacctggccgcCACCAAGGCAGAAGAAgc                                                                                                                                    <  1:1220153‑M2/18‑1 (MQ=255)                                                                    gaaacgctcgttggactgatccagctggcgcttgaaggcggcttcttctgccttggtggcgcccaggacaacctggccgcCACCAAGGCAGAAGAAgc                                                                                                                                    >  2:1220153‑M2/81‑98 (MQ=255)                                                                       gCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTCGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCg                                                                             >  2:746351/1‑150 (MQ=255)                                                                         gACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                                                         <  2:1363296/88‑1 (MQ=255)                                                                         gACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                                                         >  1:1363296/1‑88 (MQ=255)                                                                                 aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCtt                                                                                                                              >  2:1506168/1‑91 (MQ=255)                                                                                 aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCtt                                                                                                                              <  1:1506168/91‑1 (MQ=255)                                                                                 aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCg                                                                   >  1:373627/1‑150 (MQ=255)                                                                                  aacccTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGa                                                                  <  2:372392/147‑1 (MQ=255)                                                                                   aaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCATCGGAAGGGGGGCCTTTCGGACAAGACCGAc                                                                 >  1:1235208/1‑150 (MQ=255)                                                                                     ccTGATCCTGCAAACCGCGCAAAACTACTTCGCCGGCCTCCGCGCCCAGGACAACCTGGCTGCCACCACGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCTGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGt                                                               <  2:643503/150‑1 (MQ=255)                                                                                      cTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACACCCTGGCCTCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCa                                                                                                                     >  2:964668/1‑95 (MQ=255)                                                                                      cTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCa                                                                                                                     <  1:964668/95‑1 (MQ=255)                                                                                        gATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAg                                                                                                                                               <  2:640466/67‑1 (MQ=255)                                                                                        gATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAg                                                                                                                                               >  1:640466/1‑67 (MQ=255)                                                                                         aTCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGtgctg                                                           <  1:636391/150‑1 (MQ=255)                                                                                          tCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGtgctgc                                                          >  1:1075113/1‑150 (MQ=255)                                                                                             tGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGTACAAGACCGACGTGCTGCAAt                                                       >  2:878657/1‑150 (MQ=255)                                                                                                   ccGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTg                                                                                      >  2:77978/1‑113 (MQ=255)                                                                                                   ccGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTg                                                                                      <  1:77978/113‑1 (MQ=255)                                                                                                    cgcgCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGc                                                >  2:781787/1‑150 (MQ=255)                                                                                                      cgcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCa                                              >  1:550314/1‑150 (MQ=255)                                                                                                      cgcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCa                                              <  2:1417707/150‑1 (MQ=255)                                                                                                       gcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAg                                             <  2:373627/150‑1 (MQ=255)                                                                                                           ggcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCGGCAATCCCAAGCCAGTTAt                                         <  1:902575‑M1/131‑1 (MQ=255)                                                                                                           aaCTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGTACAAGACCGACGTGCTGCAATCCCAAGCCAGTTAt                                         <  1:878657/150‑1 (MQ=255)                                                                                                            gcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTc                                                                                            >  2:1220153‑M1/19‑98 (MQ=255)                                                                                                            gcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTc                                                                                            <  1:1220153‑M1/80‑1 (MQ=255)                                                                                                            actactTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATg                                        <  2:550314/150‑1 (MQ=255)                                                                                                              tactTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGac                                      >  1:195558/1‑150 (MQ=255)                                                                                                                 ttCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGt                                                                                       >  1:386326/1‑98 (MQ=255)                                                                                                                 ttCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACt                                   >  1:1426813/1‑150 (MQ=255)                                                                                                                 ttCGCCGGCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGt                                                                                       <  2:386326/98‑1 (MQ=255)                                                                                                                     ccGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCAc                               >  1:660599/1‑150 (MQ=255)                                                                                                                       gTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGaca                                     <  1:713943/142‑1 (MQ=255)                                                                                                                       gTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGaca                                     >  2:713943/1‑142 (MQ=255)                                                                                                                        tcctccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACggg                            <  2:1075113/150‑1 (MQ=255)                                                                                                                           tccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTggg                                                                                    >  1:662273/1‑91 (MQ=255)                                                                                                                           tccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTggg                                                                                    <  2:662273/91‑1 (MQ=255)                                                                                                                            ccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACa                                                                         <  1:895144/101‑1 (MQ=255)                                                                                                                            ccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACa                                                                         >  2:895144/1‑101 (MQ=255)                                                                                                                                  ccAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGGCCAACCGGat                  >  2:296397/1‑150 (MQ=255)                                                                                                                                         aaCCTGGCCGCCCCCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACAAGCGTTTCGACGTGGGCCTTTCAGACAAGACCGACCTGCCGCAACCACGACCCAGACAAGACCCTGCAAGTGCCAACCGGACCATCGcc           >  2:303681/1‑150 (MQ=255)                                                                                                                                         aaCCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGGCCAACCGGATCATCGcc           >  1:1078908/1‑150 (MQ=255)                                                                                                                                           ccTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTg                                                                                                                 <  2:331553/46‑1 (MQ=255)                                                                                                                                           ccTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTg                                                                                                                 >  1:331553/1‑46 (MQ=255)                                                                                                                                           ccTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                                          <  1:1147014/53‑1 (MQ=255)                                                                                                                                           ccTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                                          >  2:1147014/1‑53 (MQ=255)                                                                                                                                             tGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTgg                                                                                                                >  1:1129410/1‑45 (MQ=255)                                                                                                                                             tGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTgg                                                                                                                <  2:1129410/45‑1 (MQ=255)                                                                                                                                                  gcCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGGCCAACCGGATCATCGCCGAACGCCAg  <  1:945772‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGGCCAACCGGATCATCGCCGAACGCCAG  >  NC_002947/5596871‑5597165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.