| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1068110 | 105 (1.190) | 9 (0.110) | 10/234 | NT | 8.0% | coding (273/948 nt) | PP_0926 | membrane protein |
| ? | NC_002947 | = 1068121 | 107 (1.290) | coding (284/948 nt) | PP_0926 | membrane protein | |||||
GTCGCCTCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1067955‑1068110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatcGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTTGAA < NC_002947/1068121‑1067973 ggccCCTCGCAGCTTGTATTCAACTTCTGCATGCCGGCGCTGCTCTTCCGCGGCAGCTCCCCTGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATG < 2:437953/146‑1GTCGCCTCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATG < 2:1902705/150‑1 TCGCCTCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGG > 2:648093/1‑150 GCCTCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCC > 1:485713/1‑150 TCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATC > 1:1588662/1‑150 AGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCCCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATCGGGC < 1:1946705/150‑1 CGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATCGGGCTGC‑GCCAGATGGC < 1:907853/150‑1 ACCACGCCGACCTTGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCCCGGTC‑‑GGCCATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGG < 1:402747/130‑1 CCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATC > 2:875902/1‑83 CCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATC < 1:875902/83‑1 TTTCGCCATTGCCTGGGGCATGGCCATCTGGCGCA‑GCCCGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACC < 2:1347706/105‑1 TTTCGCCATTGCCTGGGGCATGGCCATCTGGCGCA‑GCCCGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACC > 1:1347706/1‑105 CCATTGCCTGGGGCATGGCCATCTGGC‑GCAGCCCGATGGCC‑‑GACCGGGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGT < 2:402747/130‑1 CATTGCCTGGGGCATGGCCATCTGGCGCA‑GCCCGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGAT < 1:2208653/135‑1 CATTGCCTGGGGCATGGCCATCTGGC‑GCAGCCCGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGAT > 2:2208653/1‑135 CATTGCCTGGGGCACGGCCATCGGGCTGC‑GCCAGATGGCCAT < 2:1418813/42‑1 CATTGCCTGGGGCACGGCCATCGGGCTGC‑GCCAGATGGCCAT > 1:1418813/1‑42 GCATGGCCATCTGGC‑GCAGCCCGATGGCCGTGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGT < 2:1516035/120‑1 GCATGGCCATCTGGC‑GCAGCCCGATGGCCGTGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGT > 1:1516035/1‑120 CCATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAG > 1:783630/1‑130 CCATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAG < 2:783630/130‑1 CATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTT > 1:2025297/1‑150 CATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTT < 2:868689/150‑1 ATCGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTTG > 1:526259/1‑150 CGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTTGAA < 2:1356286/150‑1 GTCGCCTCGCAGCTGGTATTCAACGTCTGCATGCCGGCGCTGCTCTTCCTCGGCATCTACCACGCCGACCTGGCCGCAGCGGTCAAGCCCGGTGTCATCCTGTATTTCATCGTCGCCACCCTGGTCGGTTTCGCCATTGCCTGGGGCATGGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1067955‑1068110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatcGGGCTGC‑GCCAGATGGCCATGCCCCAGGCAATGGCGAAACCGACCAGGGTGGCGACGATGAAATACAGGATGACACCGGGCTTGACCGCTGCGGCCAGGTCGGCGTGGTAGATGCCGAGGAAGAGCAGCGCCGGCATGCAGACGTTGAA < NC_002947/1068121‑1067973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |