New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2226811	41 (0.460)	5 (0.060)	5/240	NT	10.6%	coding (634/804 nt)	PP_1964	dGMP/dTMP/dhydroxyCMP kinase
	?	NC_002947	= 2226824	45 (0.530)					coding (621/804 nt)	PP_1964	dGMP/dTMP/dhydroxyCMP kinase

TCCAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2226661‑2226811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattCTGGC‑GCAGCCATAATGGAGTAATTTGGCATATCACTCGCAACAATGCAATAAAAGTACAATCCCATTCTTCAGAAGAT  <  NC_002947/2226824‑2226746                                                                                                                                                                                                                                         TCCAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCAT                                                                                   <  1:192602/150‑1                      TTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTCTGGC‑GCAGCCATAATGGAG                                                             <  1:1135866/150‑1                                                                                                                      CATTGTTGCGAGTGATATGCCAAATTACTCCATTCTGGC‑GCAGCCATAATGGAGTAAT                                                         >  1:1001043/1‑58                                                                                                                      CATTGTTGCGAGTGATATGCCAAATTACTCCATTCTGGC‑GCAGCCATAATGGAGTAAT                                                         <  2:1001043/58‑1                                                                                                                                       TGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGGAGTAATTTGGCATATCACTCGCAACAATGCAATAAAAGTACAATCCCATTCTTCAGAAGAT  >  2:117175/1‑96                                                                                                                                       TGCCAAATTACTCCATTATGGC‑TGCGCCAGAATGGAGTAATTTGGCATATCACTCGCAACAATGCAATAAAAGTACAATCCCATTCTTCAGAAGAT  <  1:117175/96‑1                                                                                                                                                                                                                                         TCCAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2226661‑2226811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cattCTGGC‑GCAGCCATAATGGAGTAATTTGGCATATCACTCGCAACAATGCAATAAAAGTACAATCCCATTCTTCAGAAGAT  <  NC_002947/2226824‑2226746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.