New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2226811 | 41 (0.460) | 5 (0.060) | 5/240 | NT | 10.6% | coding (634/804 nt) | PP_1964 | dGMP/dTMP/dhydroxyCMP kinase |
? | NC_002947 | = 2226824 | 45 (0.530) | coding (621/804 nt) | PP_1964 | dGMP/dTMP/dhydroxyCMP kinase |
CAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTCGCGA > NC_002947/2226663‑2226958 | cAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTa > 1:1109971/1‑150 (MQ=255) aaGCGGATTCAACCTTTTTTCTTAGTTCTTCGATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTAt > 2:1436516/1‑150 (MQ=255) aaGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTAt < 1:1420257/150‑1 (MQ=255) gCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATgg < 2:1078016/150‑1 (MQ=255) ttttCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGc > 2:946383/1‑150 (MQ=255) ttCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTctggcgcagccataatggag < 1:1135866‑M1/150‑21 (MQ=255) tCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCCATTCCATCTTCTGAAAGTTGGGATTGGACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGc > 1:1451360/1‑150 (MQ=255) ttAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCtt > 2:868271/1‑150 (MQ=255) gTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGTATTGTACTTTTATTGCATTGTTGCGATTGATATGGCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGt > 2:928752/1‑150 (MQ=255) aTTGTATCATTGTTTTCGATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCatat > 1:1986845/1‑150 (MQ=255) ttGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATc < 1:946383/150‑1 (MQ=255) ttGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATcc > 1:1770475/1‑150 (MQ=255) ttGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATcc > 2:296423/1‑150 (MQ=255) ttGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATcc > 1:359061/1‑150 (MQ=255) gTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCtt < 2:359061/150‑1 (MQ=255) tttCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCGAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTtaa > 1:751878/1‑150 (MQ=255) aTTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATg > 2:522888/1‑150 (MQ=255) tGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCt < 2:928015/132‑1 (MQ=255) tGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCt > 1:928015/1‑132 (MQ=255) tGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGaa > 1:2034044/1‑150 (MQ=255) ttGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCa < 2:1451360/150‑1 (MQ=255) tCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCAttt > 2:2002415/1‑150 (MQ=255) tCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCAttt > 2:1571880/1‑150 (MQ=255) aaTTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGt < 1:868271/150‑1 (MQ=255) aTTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGtt < 2:1109971/150‑1 (MQ=255) aTCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCGAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTgg < 2:751878/150‑1 (MQ=255) aTCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTCTGGCGCA‑GCCATaatggagtaatttggca < 1:117175‑M2/96‑18 (MQ=255) aTCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTCTGGC‑GCAGCCATaatggagtaatttggca > 2:117175‑M2/1‑79 (MQ=255) cttctGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGc < 2:1986845/150‑1 (MQ=255) aagaaTGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAg > 2:17815/1‑150 (MQ=255) gaaTGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAggg > 2:1800608/1‑150 (MQ=255) aTGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGt < 1:2002415/150‑1 (MQ=255) aTGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGt < 1:1436516/150‑1 (MQ=255) gATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGat > 1:1925878/1‑150 (MQ=255) gTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTg > 2:1077592/1‑150 (MQ=255) gTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTg > 1:1975060/1‑150 (MQ=255) cATTGTTGCGAGTGATATGCCAAATTACTCCATTctggcgcagccataatggagtaat > 1:1001043‑M1/1‑34 (MQ=255) cATTGTTGCGAGTGATATGCCAAATTACTCCATTctggcgcagccataatggagtaat < 2:1001043‑M1/58‑25 (MQ=255) ttgCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTg < 1:730359/150‑1 (MQ=255) gAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGa > 2:1426509/1‑150 (MQ=255) tGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGt > 2:297754/1‑150 (MQ=255) tatGCCAAATTACTCCATTATGGCTGC‑GCCAGAATACCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGATTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTACACGCTTGCTTCTAGTGCTGACGTAag > 2:42877/1‑150 (MQ=255) tGCCAAATTACTCCATTatggctgcgccagaatggagtaatttggcatatcactcgcaacaatgcaataaaagtacaatcccattcttcagaagat < 1:117175‑M1/96‑80 (MQ=255) tGCCAAATTACTCCATTatggctgcgccagaatggagtaatttggcatatcactcgcaacaatgcaataaaagtacaatcccattcttcagaagat > 2:117175‑M1/1‑17 (MQ=255) gCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCt > 2:2153952/1‑139 (MQ=255) gCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCt < 1:2153952/139‑1 (MQ=255) cAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGa > 2:1925899/1‑150 (MQ=255) cAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGa > 1:616412/1‑150 (MQ=255) cAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGa > 2:426613/1‑150 (MQ=255) aaaTTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGaa < 2:2034044/150‑1 (MQ=255) aTTACTCCATTATGGCTGC‑GCCAGaatggagtaatttggcatatcactcgcaacaatg > 1:1001043‑M2/1‑24 (MQ=255) aTTACTCCATTATGGCTGC‑GCCAGaatggagtaatttggcatatcactcgcaacaatg < 2:1001043‑M2/58‑35 (MQ=255) cTCCATTATGGCTGC‑GCCAGaatggagtaatttggcatatcactcgcaacaatgcaataaaagtacaatcccattcttcagaagatggaattgagttccgcaacggcgatatttcaattgaaaacaatgatacaattgaagaactaagaa < 1:1135866‑M2/150‑131 (MQ=255) tCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTcg > 2:568198/1‑150 (MQ=255) tCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTcg < 2:1330994/150‑1 (MQ=255) ccATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTcgc < 1:928752/150‑1 (MQ=255) cATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATAtt > 1:1394299/1‑107 (MQ=255) cATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATAtt < 2:1394299/107‑1 (MQ=255) cATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTcgcg > 1:1533771/1‑150 (MQ=255) aTTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTCGCGa < 1:426613/150‑1 (MQ=255) | CAAGCGGATTCAACCTTTTTTCTTAGTTCTTCAATTGTATCATTGTTTTCAATTGAAATATCGCCGTTGCGGAACTCAATTCCATCTTCTGAAGAATGGGATTGTACTTTTATTGCATTGTTGCGAGTGATATGCCAAATTACTCCATTATGGCTGC‑GCCAGAATGCCGCTTCGTTTTCATATCTGATATCCTTAATAATGAAGATGCTTTTACCAGCGGCATTTGTTAGTGGGCGAGTAGGGGTTGATATTGCACGCTTGCTTCTAGTGCTGACGTAAGAGGGAAAGTCTCGCGA > NC_002947/2226663‑2226958 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |