| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3917240 = | 76 (0.860) | 6 (0.070) | 5/232 | NT | 8.0% | coding (978/3129 nt) | mexB | multidrug resistance protein MexB |
| ? | NC_002947 | 3917268 = | 67 (0.810) | coding (1006/3129 nt) | mexB | multidrug resistance protein MexB | |||||
GGTGCCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3917396‑3917240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgtcgATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGCTGGCCAT > NC_002947/3917268‑3917416 GGTGCCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGA < 1:486502/150‑1 GTGCCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAG < 1:741177/150‑1 GCCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGT < 2:1886797/150‑1 CCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGGCTCGAATATTGTGGTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGTG < 1:1573582/150‑1 CCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGTG > 1:913423/1‑150 CATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGTGTC > 2:496370/1‑150 GCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTCGCCGTTCGTCAAGGTGTCGATCGAGCAGGTCA > 1:2140025/1‑150 CAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTCGCCGTTCGTCAAGGTGTCGATCGAGCAGGTCATCAACAC < 2:2140025/150‑1 TCGACACCTTGACGAACGGCGAGGTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGT > 2:883549/1‑136 TCGACACCTTGACGAACGGCGAGGTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGT < 1:883549/136‑1 TCGACACCTTGACGAACGGCGAGGTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTG > 1:889686/1‑92 TCGACACCTTGACGAACGGCGAGGTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTG < 2:889686/92‑1 AGGTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGC < 1:1886797/150‑1 GTGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGCTG < 1:1901828/150‑1 TGTCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGCTGG < 2:2078938/150‑1 TCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGC > 2:1560065/1‑137 TCGATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGC < 1:1560065/137‑1 GATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGCTGGCCAT > 1:1097524/1‑150 GATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGT < 2:1281270/138‑1 GATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGT > 1:1281270/1‑138 GGTGCCCATCAATGCCACTGGCACGACCAGGGTCGGGATCAGCGTGTAGCGCAGGTTCTGCAGGAACAGGAACATGACTGCGAACACCAGCAGCATGGCCTCGAACAGGGTGTTGATGACCTGCTCGATCGACACCTTGACGAACGGCGAGGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3917396‑3917240‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgtcgATCGAGCAGGTCATCAACACCCTGTTCGAGGCCATGCTGCTGGTGTTCGCAGTCATGTTCCTGTTCCTGCAGAACCTGCGCTACACGCTGATCCCGACCCTGGTCGTGCCAGTGGCATTGATGGGCACCTTCGCCGTGATGCTGGCCAT > NC_002947/3917268‑3917416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |