| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5696617 = | 69 (0.780) | 6 (0.070) | 3/234 | NT | 10.9% | intergenic (+13/‑199) | pyrC'/hslV | dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit |
| ? | NC_002947 | 5696692 = | 33 (0.400) | intergenic (+88/‑124) | pyrC'/hslV | dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit | |||||
TCATATGGGGGTGGGGGGAAGGATTTCAACCGGGGGGGATGAATGGTCGCGCTTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5696771‑5696617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTT > NC_002947/5696692‑5696831 TCAGATGGGGGTGGGGGGAAGGATTTCAACCGGGGGGGATGAATGGTCGCGCTTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCGACTGGGGTTCGACAGGCCTTGGAATTGTGGTGATGTTGTGGGTAGGGGCGTG > 1:921630/1‑150 GGGATGAATGGTCGCGCTTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGC > 1:2202843/1‑116 GGGATGAATGGTCGCGCTTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGC < 2:2202843/116‑1 TTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGT > 1:1767187/1‑97 TTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGT < 2:1767187/97‑1 ctcttCCGATCTCACAGGGTTACCACATGCATTCGCGGTTTGGTGATCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCACCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGA < 2:1355116/145‑1 atctCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGA < 1:1533367/146‑1 CCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGCAAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTT < 1:1848778/112‑1 CCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGCAAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTT > 2:1848778/1‑112 ACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAA < 1:1045939/114‑1 ACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAA > 2:1045939/1‑114 GCGTGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTT < 2:2114594/150‑1 TCATATGGGGGTGGGGGGAAGGATTTCAACCGGGGGGGATGAATGGTCGCGCTTGGCGGGGGGACTATGTGAAGGCATTCGCGGGCATGCCCGCTCCCACAGGGTTACCACATGCCTTGGAATTGTGGTGATCCTGTGGGAGCGGGCGTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5696771‑5696617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCCATATGAGTCTGCATCAGGCACTTTCGCCCCGCTGCGTGGAGACTCTCCCCTTGACCACAATCGTTT > NC_002947/5696692‑5696831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |