New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5696617 =	69 (0.780)	6 (0.070)	3/234	NT	10.9%	intergenic (+13/‑199)	pyrC'/hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
	?	NC_002947	5696692 =	33 (0.400)					intergenic (+88/‑124)	pyrC'/hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit

TGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTC‑‑ATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCC  >  NC_002947/5696468‑5696765                                                                                                                                                      |                                                                                                                                                        tGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAg                                                                                                                                                         >  1:1643176/1‑150 (MQ=255)    tCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCg‑g                                                                                                                                                     <  1:167533/150‑1 (MQ=255)       aCCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCa                                                                                                                                                  >  2:2166407/1‑150 (MQ=255)       aCCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCa                                                                                                                                                  <  1:1466686/150‑1 (MQ=255)        cccGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCAc                                                                                                                                                 <  2:598335/150‑1 (MQ=255)          cGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCg‑g                                                                                                                                                     <  1:2321193/144‑1 (MQ=255)          cGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCg‑g                                                                                                                                                     >  2:2321193/1‑144 (MQ=255)          aaacgattgtggtcaaggggagagtctccacgcagcggggcgaaagtgcctgatgcagactcatatgggggtggggggaaggatttcaaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcattcGCG‑GGCACGc                                                                                                                                               <  2:2114594‑M1/10‑1 (MQ=255)             aaGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCg                                                                                                                                            <  2:1986963/150‑1 (MQ=255)                 gTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACCAGGCCTGAGTACCATGCTTAGCG‑GGCGTGCCCGCtaa                                                                                                                                        <  1:1887750/150‑3 (MQ=255)                   ccACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCca                                                                                                                                      <  2:1305805/150‑1 (MQ=255)                      ccGTTGCTGGCTAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAg                                                                                                                                   <  2:1610341/150‑1 (MQ=255)                      ccGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCg                                                                                                                                                       <  2:1730515/131‑1 (MQ=255)                      ccGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCg                                                                                                                                                       >  1:1730515/1‑131 (MQ=255)                            cTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATcac                                                                                                                             <  1:501920/150‑1 (MQ=255)                              ggCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATcacca                                                                                                                           <  1:379190/150‑1 (MQ=255)                               gCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAAGCCGGACTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATcaccac                                                                                                                          >  1:2005801/1‑150 (MQ=255)                                 gAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGGGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACaa                                                                                                                        >  1:1537235/1‑150 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GTCACGCCCGCTCCCACAGGATCACCACAATTcc                                                                                                                    >  1:241751/1‑150 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTc                                                                                                                                         <  2:1567745/129‑1 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTc                                                                                                                                         <  2:1569114/129‑1 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTc                                                                                                                                         >  1:1567745/1‑129 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTc                                                                                                                                         >  1:1569114/1‑129 (MQ=255)                                     aaTGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGGTTACcacatgcct                                                                                                                    >  1:2129052/1‑145 (MQ=255)                                       tGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCaa                                                                                                                  <  2:1913640/150‑1 (MQ=255)                                          ttCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAg                                                                                                                                   <  1:1776132/130‑1 (MQ=255)                                          ttCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAg                                                                                                                                   >  2:1776132/1‑130 (MQ=255)                                          ttCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACaa                                                                                                                        >  2:336159/1‑141 (MQ=255)                                          ttCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACaa                                                                                                                        <  1:336159/141‑1 (MQ=255)                                           tctcCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACAGCTGCCACGAGGCCCGAGTAGCAGGCTTAGCG‑GGAACGCGCGCTCCCGCAGGATCCGTACAATCCCAAGGCa                                                                                                              >  2:851806/1‑150 (MQ=255)                                             tcCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCAtg                                                                                                            >  1:1596659/1‑150 (MQ=255)                                               ccGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCcac                                                                                                                                     <  1:403145/123‑1 (MQ=255)                                               ccGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCcac                                                                                                                                     >  2:403145/1‑123 (MQ=255)                                                    gCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAAc                                                                                                     <  1:151655/150‑1 (MQ=255)                                                         aaCTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  2:1495317/1‑150 (MQ=255)                                                           cTGCCCGTTCATCGGCTACTGCCTGCCGGGCGCCGTGCGTTATACCTTGGTCGCTGGCCACATCTGCCCCGAGGCCTGAGTACCATGCTTAGCG‑GCCACGCCCACCCCCACAGGATCACCACAATTCCCAGGCACGTGCTAACCCTGTgg                                                                                              <  2:1251077/150‑1 (MQ=255)                                                           cTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  2:1703883/1‑148 (MQ=255)                                                           cTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                <  1:1703883/148‑1 (MQ=255)                                                             gCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGa                                                                                            >  1:460796/1‑150 (MQ=255)                                                              cccGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAg                                                                                           >  1:1366949/1‑150 (MQ=255)                                                              cccGTTCAGCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACAACAATACCAAGGCATGTGGTAACCATGTGGGAg                                                                                           >  1:1064860/1‑150 (MQ=255)                                                                cGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCGTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCg                                                                                         <  1:1495317/150‑1 (MQ=255)                                                                 gTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCgg                                                                                        >  1:1094092/1‑150 (MQ=255)                                                                 gTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCgg                                                                                        <  1:1470992/150‑1 (MQ=255)                                                                 gTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCgg                                                                                        <  2:837879/150‑1 (MQ=255)                                                                  ttCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGGCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATGCCAAGGCATGTGGTAACCGTGTGGCAGCtgg                                                                                       >  1:851697/1‑150 (MQ=255)                                                                      tcatatgggggtggggggaaggatttcaaccggggggggtgaatggtcgcgcttggcggggggactatgtgaaggcattcGCG‑GGCATGCCCGCTCCCACAGGATCACCAAACCGCGAATGCATGTGGTAACCCTGTGagatcggaagag                                                                                   <  2:1355116‑M1/70‑6 (MQ=255)                                                                      tcatatgggggtggggggaaggatttcaaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcattcGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGgagcgggagat                                                                                   <  1:1533367‑M1/70‑5 (MQ=255)                                                                      tCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATg                                                                                   >  1:2005705/1‑150 (MQ=255)                                                                      tCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATg                                                                                   >  1:863451/1‑150 (MQ=255)                                                                         gCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCaa                                                                                                                  <  1:1505527/116‑1 (MQ=255)                                                                         gCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCaa                                                                                                                  >  2:1505527/1‑116 (MQ=255)                                                                         gCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAAccc                                                                                                   >  1:719716/1‑131 (MQ=255)                                                                         gCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAAccc                                                                                                   <  2:719716/131‑1 (MQ=255)                                                                              tgcctgccGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGaa                                                                           >  1:1047053/1‑150 (MQ=255)                                                                              tgcctgccGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGaa                                                                           >  2:2023612/1‑150 (MQ=255)                                                                                cctgccGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                <  2:1059258/127‑1 (MQ=255)                                                                                cctgccGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  1:1059258/1‑127 (MQ=255)                                                                                   gcggggCGGGGTGCGTTTTTTCTTGGTCGATGGCCACATCTCCCACGAGGCCTGAGTACCATGCTTAGGC‑GGTGCGCCCGATCCCACAGGATCACCACATTTCCAAGGCAGGTTGTAACCCATGGGGAGCGGGCATGCCCGCGAATGCCt                                                                      <  2:1643176/147‑1 (MQ=255)                                                                                     cGGGCGCGGAGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTAACATGCTTAGCG‑AGCACGCCCGATACAACAGGAAAACCAAAATACCACTGCATGTGGTACCTATGTTGGAACGGGAATAGCCACGAGTGccata                                                                    >  2:999316/1‑147 (MQ=255)                                                                                      cagggcgGGGCGGTATCCCTTGCTAGATGGCCCCCTCTGCCACGAGCGGTGACTACCTTGCGTGGCG‑GGCGCGCTCTCTCCCACAGGATCACCACATCTCCAAGGCATGTGGTAACCCTGTGTGAGCGGGCATGCCCGCGAATGCCTTca                                                                   <  2:2005705/146‑1 (MQ=255)                                                                                         ggcgGTGCGTTATACCTTGGTCGATGGCCACATGTGCCACGAGGCATGAGTACCATGCGTAGGG‑GGCACGTCCGACCCCACTGGATGACCACAATTCCCAGGCAGGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACAt                                                                <  2:1047053/149‑1 (MQ=255)                                                                                            ggTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAAGTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGGCCGCGAATGCCTTAACATAGt                                                             >  1:798603/1‑150 (MQ=255)                                                                                             tttcaaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcattcGCG‑GGCATGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                <  1:1045939‑M1/57‑1 (MQ=255)                                                                                             tttcaaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcattcGCG‑GGCATGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  2:1045939‑M1/58‑114 (MQ=255)                                                                                               gCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCgg                                                                                        >  2:156906/1‑120 (MQ=255)                                                                                               gCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCgg                                                                                        <  1:156906/120‑1 (MQ=255)                                                                                                 aaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcatttGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTgg                                                                                              <  1:1848778‑M1/59‑1 (MQ=255)                                                                                                 aaccgggggggatgaatggtcgcgcttggcggggggactatgtgaaggcatttGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTgg                                                                                              >  2:1848778‑M1/54‑112 (MQ=255)                                                                                                       ccTTGGTCGATGGCCACATCTCCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGCGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCGCGCaaa                                                  >  1:693696/1‑150 (MQ=255)                                                                                                        cTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  1:1589485/1‑103 (MQ=255)                                                                                                        cTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                <  2:1589485/103‑1 (MQ=255)                                                                                                        cTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGccgaa                                                 >  1:1754090/1‑147 (MQ=255)                                                                                                           cgTCGAGGGCCACATCCGCCACGAGGCGTGACTGCCAGGCTT‑GCGCGGTGCGTTAGCTCTCAGTGGATCACCACAATTCCAAGGCATGTTGTATACCTGGGTGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAgcgc                                              <  2:863451/149‑1 (MQ=255)                                                                                                             tCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGAGCATGCCCGCGAATGCCTTCACATGGTCTCCCCTCCCATCGCGa                                            >  2:1388464/1‑150 (MQ=255)                                                                                                               gATGGCCACATCTGCCACGAGGCGTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTACACCCGCCCAGCGCGAcc                                          >  2:794926/1‑150 (MQ=255)                                                                                                                    ccACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCTCCCCGCCAAGCGCGACCATTC‑‑a                                   >  1:1278049/1‑150 (MQ=255)                                                                                                                                 gAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                >  2:1327837/1‑78 (MQ=255)                                                                                                                                 gAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCtgt                                                                                                <  1:1327837/78‑1 (MQ=255)                                                                                                                                    gCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTCGTATccccccctccaca                     >  2:1652104/1‑144 (MQ=255)                                                                                                                                    gCCTGAGTACCATGCTTAGCG‑GGAAGGGCTTTTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTC‑‑ATCCCCCCCGGTTGaaa                   >  1:1815539/1‑150 (MQ=255)                                                                                                                                     ccTGAGTACCATGCTTAGCC‑GGTACGCCAGCTCCTGCAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTC‑‑ATCCCCCCCGGTTGAAAt                  <  2:460796/150‑1 (MQ=255)                                                                                                                                                     aGCG‑GCCACGCCCGCCCCCACAGGATCACCACAATTCCCAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTC‑‑ATCCCCCCCGGTTGAAATCCTTCcccccaccccc  <  2:2321256/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                        TGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACCTTGGTCGATGGCCACATCTGCCACGAGGCCTGAGTACCATGCTTAGCG‑GGCACGCCCGCTCCCACAGGATCACCACAATTCCAAGGCATGTGGTAACCCTGTGGGAGCGGGCATGCCCGCGAATGCCTTCACATAGTCCCCCCGCCAAGCGCGACCATTC‑‑ATCCCCCCCGGTTGAAATCCTTCCCCCCACCCCC  >  NC_002947/5696468‑5696765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.