BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3813252	70 (0.790)	6 (0.070)	6/234	NT	8.1%	coding (286/852 nt)	PP_3369	LysR family transcriptional regulator
*	?	NC_002947	= 3813257	71 (0.850)	6 (0.070)	6/234	NT	8.1%	coding (291/852 nt)	PP_3369	LysR family transcriptional regulator

Only 100 of 104 total aligned reads displayed.

GCTGGTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTGACATCAGCATCGCCCTG  >  NC_002947/3813107‑3813401

gCTGGTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCtctc                                                                                                                                                   <  1:1200266/150‑1 (MQ=255)

gCTGGTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCtctc                                                                                                                                                   <  1:1391866/150‑1 (MQ=255)

  tGGTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCAAAAGTGTTGTGGAACTCGCCGAGCAGAGGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGg                                                                                                                                                 <  1:44923‑M2/150‑2 (MQ=255)

    gacgaccgacgtCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgca                                                                                                                                               <  2:1163394‑M2/148‑4 (MQ=255)

    gTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgca                                                                                                                                               >  1:2305592‑M2/1‑147 (MQ=255)

    gTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgca                                                                                                                                               >  2:1585221‑M2/1‑147 (MQ=255)

       gaccgacGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgcacca                                                                                                                                            <  1:249016‑M2/150‑7 (MQ=255)

          cgacGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCtctc                                                                                                                                                   >  1:210603/1‑140 (MQ=255)

            gcgTCCCCGCGCTTATGCCCTCCCCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgcaccac                                                                                                                                           >  1:592196‑M2/2‑139 (MQ=255)

            gcgTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGgcaccac                                                                                                                                           <  2:592196‑M2/145‑8 (MQ=255)

            acGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGgc                                                                                                                                       >  1:441154/1‑150 (MQ=255)

                 cccGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCgctgc                                                                                                                                  >  1:2142640/1‑150 (MQ=255)

                  ccGCGCGTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCgctgct                                                                                                                                 >  2:624956/1‑150 (MQ=255)

                    gcgcTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTgg                                                                                                                               <  1:126981/150‑1 (MQ=255)

                     ctcTTATGCCCCCACCCGCGAAGGCCAACGTGGTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTggg                                                                                                                              <  2:1882736/148‑1 (MQ=255)

                        ttATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgcag                                                                                                                           >  2:1384267/1‑150 (MQ=255)

                          aTGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgcagca                                                                                                                         <  1:906236/150‑1 (MQ=255)

                           tGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTggg                                                                                                                              >  2:839987/1‑144 (MQ=255)

                           tGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTggg                                                                                                                              <  1:839987/144‑1 (MQ=255)

                               cTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGGGGAAGGCGAAGTGGTGCTCTCGGCACAACCGGCGCTGCTGGGCGGcatcatt                                                                                                                    >  1:799201/1‑149 (MQ=255)

                                tCACCCACGAAGGCCAACTTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCg                                                                                                                   >  2:533338/1‑150 (MQ=255)

                                   cccACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGccc                                                                                                                <  2:151766/150‑1 (MQ=255)

                                      aCGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccactt                                                                                                                                         >  1:2206325‑M1/1‑108 (MQ=255)

                                      aCGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccactt                                                                                                                                         <  2:2206325‑M1/122‑15 (MQ=255)

                                        gAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGgcgc                                                                                                           <  2:528656/150‑1 (MQ=255)

                                        gAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCCTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGgcgc                                                                                                           >  1:999063/1‑150 (MQ=255)

                                         aaGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGcc                                                                                                          >  1:344251/1‑150 (MQ=255)

                                          aGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCt                                                                                                         >  2:2143367/1‑150 (MQ=255)

                                           ggCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTg                                                                                                        <  2:330993/150‑1 (MQ=255)

                                             ccAACGTGTTGCGGAACGCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTggg                                                                                                      >  2:1196054/1‑150 (MQ=255)

                                              cAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGc                                                                                                     >  2:783869/1‑150 (MQ=255)

                                                  gtgtTGCGGAACTCGCCGAGCAGATGGCCGTGTCCTCTTTTGCCCTGGAGCGTTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGc                                                                                                 >  1:761590/1‑150 (MQ=255)

                                                     ttGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGt                                                                                              <  1:624956/150‑1 (MQ=255)

                                                       gCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCtctc                                                                                                                                                   >  1:1831119/1‑95 (MQ=255)

                                                       gCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCtctc                                                                                                                                                   <  2:1831119/95‑1 (MQ=255)

                                                        cGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgc                                                                                                                             >  1:552354/1‑116 (MQ=255)

                                                        cGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgc                                                                                                                             <  2:552354/116‑1 (MQ=255)

                                                         ggAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCa                                                                                          <  1:906472/150‑1 (MQ=255)

                                                                      cAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAg                                                                             <  2:63481/150‑1 (MQ=255)

                                                                           ggCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTgcg                                                                        >  1:182977/1‑150 (MQ=255)

                                                                            gCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTgcgc                                                                       <  1:783869/150‑1 (MQ=255)

                                                                            gCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTgcgc                                                                       <  2:2087071/150‑1 (MQ=255)

                                                                                 gTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGaa                                                                  <  2:44923/150‑1 (MQ=255)

                                                                                  tCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAg                                                                 >  2:1684324/1‑150 (MQ=255)

                                                                                   ccTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGc                                                                >  1:1139713/1‑150 (MQ=255)

                                                                                       ttttGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGt                                                            <  2:2271517/150‑1 (MQ=255)

                                                                                        gatGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTa                                                           >  2:2004730/3‑150 (MQ=255)

                                                                                         ttGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAg                                                          <  2:1139713/150‑1 (MQ=255)

                                                                                            cccTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgca                                                       <  2:182977/150‑1 (MQ=255)

                                                                                            cccTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgca                                                       <  1:199529/150‑1 (MQ=255)

                                                                                             ccTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTTGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCCACGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgcag                                                      >  1:1780733/1‑150 (MQ=255)

                                                                                             ccTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgcag                                                      >  1:1282663/1‑150 (MQ=255)

                                                                                                    cATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccacttc                                                                                                                                        <  1:1103694‑M1/61‑16 (MQ=255)

                                                                                                    cATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccacttc                                                                                                                                        >  2:1103694‑M1/1‑46 (MQ=255)

                                                                                                      tttCGCCAGCGCCGGCCAACAGACCGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCaa                                             >  2:1146517/1‑150 (MQ=255)

                                                                                                      tttCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCaa                                             <  1:261904/150‑1 (MQ=255)

                                                                                                      tttCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCaa                                             <  2:513637/150‑1 (MQ=255)

                                                                                                      tttCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCaa                                             <  2:871528/150‑1 (MQ=255)

                                                                                                      tttCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCaa                                             <  1:1163394/150‑1 (MQ=255)

                                                                                                       ttCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAg                                            <  1:533338/150‑1 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgc                                                                                                                             <  1:1268681/64‑1 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGgc                                                                                                                             >  2:1268681/1‑64 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCGTCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAACTCCAAGGCATc                                       >  2:10500/1‑150 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAgc                                                                                        <  2:1198372/101‑1 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAgc                                                                                        >  1:1198372/1‑101 (MQ=255)

                                                                                                            cAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATc                                       <  1:2004730/150‑1 (MQ=255)

                                                                                                                   ggCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTc                                >  1:1869755/1‑150 (MQ=255)

                                                                                                                      cAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgcagc                                                     >  1:2297159/1‑126 (MQ=255)

                                                                                                                      cAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGgcagc                                                     <  2:2297159/126‑1 (MQ=255)

                                                                                                                      cAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTccgc                             <  2:2142640/150‑1 (MQ=255)

                                                                                                                       aaCAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccac                                                                                                                                           >  1:408180‑M1/1‑27 (MQ=255)

                                                                                                                       aaCAGACAGTGGAAGGCGAAGTGGTGCcgagagcaccac                                                                                                                                           <  2:408180‑M1/39‑13 (MQ=255)

                                                                                                                            acagTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTg                                                              <  2:1259836/111‑1 (MQ=255)

                                                                                                                            acagTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTg                                                              >  1:1259836/1‑111 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGt                                                            >  1:2314998/1‑109 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGt                                                            <  2:2314998/109‑1 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTccgcc                            >  1:105640/1‑141 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTccgcc                            <  2:105640/141‑1 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTg                   >  1:1427134/1‑150 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTg                   >  2:938151/1‑150 (MQ=255)

                                                                                                                                tGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTg                   >  1:1957871/1‑150 (MQ=255)

                                                                                                                                  gAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAgc                                                                                        >  1:596271/1‑79 (MQ=255)

                                                                                                                                  gAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAgc                                                                                        <  2:596271/79‑1 (MQ=255)

                                                                                                                                  gAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTGAc                 >  1:666395/1‑150 (MQ=255)

                                                                                                                                  gAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGATGTACCAGCGCTACCCACAGCAGCGGCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTGAc                 >  1:1780737/1‑150 (MQ=255)

                                                                                                                                        gAAGTGGTGCTCTCGgcaccacttcgccttccactgtctgttggccggcgctggcgaaatg                                                                                                    >  2:1103694‑M2/1‑15 (MQ=255)

                                                                                                                                        gAAGTGGTGCTCTCGgcaccacttcgccttccactgtctgttggccggcgctggcgaaatg                                                                                                    <  1:1103694‑M2/61‑47 (MQ=255)

                                                                                                                                         aaGTGGTGCTCTCGgcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgt                                      >  1:2206325‑M2/1‑14 (MQ=255)

                                                                                                                                         aaGTGGTGCTCTCGgcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgt                                      <  2:2206325‑M2/122‑109 (MQ=255)

                                                                                                                                           gtggtgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggtgagggcataagcgcggggacgc            <  2:592196‑M1/146‑140 (MQ=255)

                                                                                                                                           gtggtgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggggagggcataagcgcggggacgc            >  1:592196‑M1/1‑7 (MQ=255)

                                                                                                                                           gtggtgCTCTCGgcaccacttcgccttccactgtctgtt                                                                                                                       >  1:408180‑M2/1‑12 (MQ=255)

                                                                                                                                           gtggtgCTCTCGgcaccacttcgccttccactgtctgtt                                                                                                                       <  2:408180‑M2/39‑28 (MQ=255)

                                                                                                                                            tggtgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggtgagggcataagcgcggggacgtcggtc       <  1:249016‑M1/150‑145 (MQ=255)

                                                                                                                                              gtgCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCAt                                        >  1:478397/1‑115 (MQ=255)

                                                                                                                                              gtgCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCAt                                        <  2:478397/115‑1 (MQ=255)

                                                                                                                                               tgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggtgagggcataagcgcggggacgtcggtcgtc    <  2:1163394‑M1/150‑148 (MQ=255)

                                                                                                                                               tgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggtgagggcataagcgcggggacgtcggtcgac    >  2:1585221‑M1/1‑3 (MQ=255)

                                                                                                                                               tgCcgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccatctgctcggcgagttccgcaacacgttggccttcgtgggtgagggcataagcgcggggacgtcggtcgac    >  1:2305592‑M1/1‑3 (MQ=255)

                                                                                                                                                 ccgagagcaccacttcgccttccactgtctgttggccggcgctggcgaaatgctccagggcaaaagaggacatggccctctgctcggcgagttccacaacacttttgccttcgtgggtgagggcataagcgcggggacgtcggtcgacca  <  1:44923‑M1/150‑150 (MQ=255)

GCTGGTCGACCGACGTCCCCGCGCTTATGCCCTCACCCACGAAGGCCAACGTGTTGCGGAACTCGCCGAGCAGATGGCCATGTCCTCTTTTGCCCTGGAGCATTTCGCCAGCGCCGGCCAACAGACAGTGGAAGGCGAAGTGGTGCTCTCGGCACCACCGGCGCTGCTGGGCAGCATCATCGCCCGGCGCCTGGGCGAGCTGTACCAGCGCTACCCACAGCTGCGCCTGAAGCTGGTAGGCAGCAAATCCAAGGCATCCTTGGTCCGCCGCGAAGCTGACATCAGCATCGCCCTG  >  NC_002947/3813107‑3813401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.